Orthogroup:group_949


Homologs in group_949

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05180 FBDBKF_05180 Morganella morganii S1 trpA tryptophan synthase subunit alpha
EHELCC_12410 EHELCC_12410 Morganella morganii S2 trpA tryptophan synthase subunit alpha
NLDBIP_12750 NLDBIP_12750 Morganella morganii S4 trpA tryptophan synthase subunit alpha
LHKJJB_12610 LHKJJB_12610 Morganella morganii S3 trpA tryptophan synthase subunit alpha
HKOGLL_11225 HKOGLL_11225 Morganella morganii S5 trpA tryptophan synthase subunit alpha
F4V73_RS05635 F4V73_RS05635 Morganella psychrotolerans trpA tryptophan synthase subunit alpha
PMI_RS06505 PMI_RS06505 Proteus mirabilis HI4320 trpA tryptophan synthase subunit alpha

Distribution of group_949 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_949 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_949

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_949.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 trpA 7

Product

# Product Occurence
1 tryptophan synthase subunit alpha 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0159 7 E Amino acid transport and metabolism (E) Tryptophan synthase alpha chain

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00290 7 Tryptophan synthase alpha chain

Annotations of the 515 SwissProt hits

Annotation Number of occurrences
Indole-3-glycerol phosphate lyase, chloroplastic 1
Tryptophan synthase 5
Tryptophan synthase alpha chain 508
Tryptophan synthase alpha chain, chloroplastic 1

Protein length

Min length 268
Max length 269
Mean length (sd) 268.1 (0.4)
Median length 268.0

Protein length distribution