Orthogroup:group_94



Homologs in group_94

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12 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10890 FBDBKF_10890 Morganella morganii S1 arsR DNA-binding transcriptional regulator, ArsR family
FBDBKF_20405 FBDBKF_20405 Morganella morganii S1 arsR DNA-binding transcriptional regulator, ArsR family
EHELCC_05335 EHELCC_05335 Morganella morganii S2 arsR DNA-binding transcriptional regulator, ArsR family
EHELCC_19730 EHELCC_19730 Morganella morganii S2 arsR DNA-binding transcriptional regulator, ArsR family
NLDBIP_05655 NLDBIP_05655 Morganella morganii S4 arsR DNA-binding transcriptional regulator, ArsR family
NLDBIP_19710 NLDBIP_19710 Morganella morganii S4 arsR DNA-binding transcriptional regulator, ArsR family
LHKJJB_02535 LHKJJB_02535 Morganella morganii S3 arsR DNA-binding transcriptional regulator, ArsR family
LHKJJB_19675 LHKJJB_19675 Morganella morganii S3 arsR DNA-binding transcriptional regulator, ArsR family
HKOGLL_15915 HKOGLL_15915 Morganella morganii S5 arsR DNA-binding transcriptional regulator, ArsR family
HKOGLL_19590 HKOGLL_19590 Morganella morganii S5 arsR DNA-binding transcriptional regulator, ArsR family
F4V73_RS08480 F4V73_RS08480 Morganella psychrotolerans - winged helix-turn-helix domain-containing protein
PMI_RS06185 PMI_RS06185 Proteus mirabilis HI4320 - ArsR family transcriptional regulator

Distribution of group_94 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_94 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_94

Orthogroup content: 12 members

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This page summarizes the annotation of all members of the orthologous group group_94.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 arsR 10
2 - 2

Product

# Product Occurence
1 DNA-binding transcriptional regulator, ArsR family 10
2 winged helix-turn-helix domain-containing protein 1
3 ArsR family transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0640 12 K Transcription (K) DNA-binding transcriptional regulator, ArsR family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01022 7 Bacterial regulatory protein, arsR family
PF12840 5 Helix-turn-helix domain

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional regulator CmtR 3
HTH-type transcriptional regulator Rv0324 1
Transcriptional repressor SmtB homolog 1
Uncharacterized HTH-type transcriptional regulator YdfF 1

Protein length

Min length 207
Max length 233
Mean length (sd) 221.1 (12.4)
Median length 230.5

Protein length distribution