Orthogroup:group_934


Homologs in group_934

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05075 FBDBKF_05075 Morganella morganii S1 pyrF orotidine-5'-phosphate decarboxylase
EHELCC_12515 EHELCC_12515 Morganella morganii S2 pyrF orotidine-5'-phosphate decarboxylase
NLDBIP_12855 NLDBIP_12855 Morganella morganii S4 pyrF orotidine-5'-phosphate decarboxylase
LHKJJB_12715 LHKJJB_12715 Morganella morganii S3 pyrF orotidine-5'-phosphate decarboxylase
HKOGLL_11330 HKOGLL_11330 Morganella morganii S5 pyrF orotidine-5'-phosphate decarboxylase
F4V73_RS05530 F4V73_RS05530 Morganella psychrotolerans pyrF orotidine-5'-phosphate decarboxylase
PMI_RS06335 PMI_RS06335 Proteus mirabilis HI4320 pyrF orotidine-5'-phosphate decarboxylase

Distribution of group_934 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_934 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_934

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_934.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pyrF 7

Product

# Product Occurence
1 orotidine-5'-phosphate decarboxylase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0284 7 F Nucleotide transport and metabolism (F) Orotidine-5'-phosphate decarboxylase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01591 7 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Pyrimidine metabolism
Metabolic pathways
Biosynthesis of cofactors		 De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00215 7 Orotidine 5'-phosphate decarboxylase / HUMPS family

Annotations of the 442 SwissProt hits

Annotation Number of occurrences
Orotidine 5'-phosphate decarboxylase 435
Orotidine 5'-phosphate decarboxylase (Fragment) 1
Uridine 5'-monophosphate synthase 6

Protein length

Min length 243
Max length 248
Mean length (sd) 244.4 (1.6)
Median length 244.0

Protein length distribution