Orthogroup:group_914


Homologs in group_914

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04935 FBDBKF_04935 Morganella morganii S1 ybcJ ribosome-associated protein YbcJ
EHELCC_06225 EHELCC_06225 Morganella morganii S2 ybcJ ribosome-associated protein YbcJ
NLDBIP_06545 NLDBIP_06545 Morganella morganii S4 ybcJ ribosome-associated protein YbcJ
LHKJJB_03425 LHKJJB_03425 Morganella morganii S3 ybcJ ribosome-associated protein YbcJ
HKOGLL_06900 HKOGLL_06900 Morganella morganii S5 ybcJ ribosome-associated protein YbcJ
F4V73_RS16075 F4V73_RS16075 Morganella psychrotolerans ybcJ ribosome-associated protein YbcJ
PMI_RS10625 PMI_RS10625 Proteus mirabilis HI4320 ybcJ ribosome-associated protein YbcJ

Distribution of group_914 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_914 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_914

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_914.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ybcJ 7

Product

# Product Occurence
1 ribosome-associated protein YbcJ 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2501 7 J Translation, ribosomal structure and biogenesis (J) Ribosome-associated protein YbcJ, S4-like RNA-binding protein

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K14761 7 ribosome-associated protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13275 7 S4 domain

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
Putative RNA-binding protein YbcJ 1
Uncharacterized protein YbcJ 1

Protein length

Unique protein length 70

Protein length distribution