Orthogroup:group_888


Homologs in group_888

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04580 FBDBKF_04580 Morganella morganii S1 alsT Na+/alanine symporter
EHELCC_05870 EHELCC_05870 Morganella morganii S2 alsT Na+/alanine symporter
NLDBIP_06190 NLDBIP_06190 Morganella morganii S4 alsT Na+/alanine symporter
LHKJJB_03070 LHKJJB_03070 Morganella morganii S3 alsT Na+/alanine symporter
HKOGLL_06545 HKOGLL_06545 Morganella morganii S5 alsT Na+/alanine symporter
F4V73_RS09035 F4V73_RS09035 Morganella psychrotolerans - sodium:alanine symporter family protein
PMI_RS10415 PMI_RS10415 Proteus mirabilis HI4320 - sodium:alanine symporter family protein

Distribution of group_888 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_888 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_888

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_888.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 alsT 5
2 - 2

Product

# Product Occurence
1 Na+/alanine symporter 5
2 sodium:alanine symporter family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1115 7 E Amino acid transport and metabolism (E) Na+/alanine symporter

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03310 7 alanine or glycine:cation symporter, AGCS family - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01235 7 Sodium:alanine symporter family

Annotations of the 10 SwissProt hits

Annotation Number of occurrences
Amino-acid carrier protein AlsT 1
Na(+)-linked D-alanine glycine permease 1
Probable sodium/glutamine symporter GlnT 1
Putative sodium/proton-dependent alanine carrier protein YrbD 1
Sodium/alanine symporter AgcS 1
Sodium/proton-dependent alanine carrier protein 1
Uncharacterized transporter HI_0183 1
Uncharacterized transporter HI_0883 1
Uncharacterized transporter YaaJ 1
Uncharacterized transporter YflA 1

Protein length

Min length 459
Max length 471
Mean length (sd) 461.7 (4.9)
Median length 459.0

Protein length distribution