Orthogroup:group_878


Homologs in group_878

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04515 FBDBKF_04515 Morganella morganii S1 speB agmatinase
EHELCC_05805 EHELCC_05805 Morganella morganii S2 speB agmatinase
NLDBIP_06125 NLDBIP_06125 Morganella morganii S4 speB agmatinase
LHKJJB_03005 LHKJJB_03005 Morganella morganii S3 speB agmatinase
HKOGLL_06480 HKOGLL_06480 Morganella morganii S5 speB agmatinase
F4V73_RS08955 F4V73_RS08955 Morganella psychrotolerans speB agmatinase
PMI_RS10310 PMI_RS10310 Proteus mirabilis HI4320 speB agmatinase

Distribution of group_878 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_878 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_878

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_878.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 speB 7

Product

# Product Occurence
1 agmatinase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0010 7 E Amino acid transport and metabolism (E) Arginase/agmatinase family enzyme

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00491 7 Arginase family

Annotations of the 223 SwissProt hits

Annotation Number of occurrences
Agmatinase 67
Agmatinase, mitochondrial 1
Arginase 27
Arginase 1, mitochondrial 3
Arginase 2, chloroplastic/mitochondrial 1
Arginase, hepatic 1
Arginase, mitochondrial 1
Arginase, non-hepatic 1 1
Arginase, non-hepatic 2 1
Arginase, non-hepatic 3 1
Arginase-1 7
Arginase-2, mitochondrial 5
Formimidoylglutamase 90
Guanidine hydrolase 1
Guanidino acid hydrolase, mitochondrial 3
Guanidinobutyrase 3
Guanidinopropionase 1
N(1)-aminopropylagmatine ureohydrolase 4
Proclavaminate amidinohydrolase 1
Putative agmatinase 1 1
Putative agmatinase 2 1
Putative agmatinase 3 1
Uncharacterized 32.2 kDa protein in hmfB 3'region 1

Protein length

Min length 306
Max length 311
Mean length (sd) 307.4 (1.6)
Median length 307.0

Protein length distribution