Orthogroup:group_856


Homologs in group_856

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04330 FBDBKF_04330 Morganella morganii S1 murC UDP-N-acetylmuramate--L-alanine ligase
EHELCC_05620 EHELCC_05620 Morganella morganii S2 murC UDP-N-acetylmuramate--L-alanine ligase
NLDBIP_05940 NLDBIP_05940 Morganella morganii S4 murC UDP-N-acetylmuramate--L-alanine ligase
LHKJJB_02820 LHKJJB_02820 Morganella morganii S3 murC UDP-N-acetylmuramate--L-alanine ligase
HKOGLL_06295 HKOGLL_06295 Morganella morganii S5 murC UDP-N-acetylmuramate--L-alanine ligase
F4V73_RS08775 F4V73_RS08775 Morganella psychrotolerans murC UDP-N-acetylmuramate--L-alanine ligase
PMI_RS10195 PMI_RS10195 Proteus mirabilis HI4320 murC UDP-N-acetylmuramate--L-alanine ligase

Distribution of group_856 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_856 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_856

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_856.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 murC 7

Product

# Product Occurence
1 UDP-N-acetylmuramate--L-alanine ligase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0773 7 M Cell wall/membrane/envelope biogenesis (M) UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01924 7 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Peptidoglycan biosynthesis
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01225 7 Mur ligase family, catalytic domain
PF02875 7 Mur ligase, glutamate ligase domain
PF08245 7 Mur ligase middle domain

Annotations of the 504 SwissProt hits

Annotation Number of occurrences
Bifunctional enzyme MurC/Ddl 4
UDP-N-acetylmuramate--L-alanine ligase 500

Protein length

Min length 473
Max length 488
Mean length (sd) 477.1 (7.1)
Median length 473.0

Protein length distribution