Orthogroup:group_837


Homologs in group_837

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04220 FBDBKF_04220 Morganella morganii S1 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
EHELCC_05510 EHELCC_05510 Morganella morganii S2 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
NLDBIP_05830 NLDBIP_05830 Morganella morganii S4 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
LHKJJB_02710 LHKJJB_02710 Morganella morganii S3 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
HKOGLL_06185 HKOGLL_06185 Morganella morganii S5 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
F4V73_RS08670 F4V73_RS08670 Morganella psychrotolerans acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
PMI_RS10060 PMI_RS10060 Proteus mirabilis HI4320 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase

Distribution of group_837 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_837 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_837

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_837.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acnB 7

Product

# Product Occurence
1 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1049 7 C Energy production and conversion (C) Aconitase B

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00330 7 Aconitase family (aconitate hydratase)
PF06434 7 Aconitate hydratase 2 N-terminus
PF11791 7 Aconitate B N-terminal domain

Annotations of the 522 SwissProt hits

Annotation Number of occurrences
2,3-dimethylmalate dehydratase large subunit 1
3-isopropylmalate dehydratase 9
3-isopropylmalate dehydratase large subunit 445
3-isopropylmalate dehydratase large subunit (Fragment) 9
3-isopropylmalate dehydratase large subunit 1 11
3-isopropylmalate dehydratase large subunit 2 10
3-isopropylmalate dehydratase large subunit gloJ 1
3-isopropylmalate dehydratase large subunit, chloroplastic 1
Aconitase AMT8 1
Aconitase AMT8-2 1
Aconitase htyD 1
Aconitate hydratase B 6
Aconitate hydratase, mitochondrial 2
Homoaconitase large subunit 1
Homoaconitase, mitochondrial 13
Homocitrate dehydratase, mitochondrial 1
Isopropylmalate/citramalate isomerase large subunit 1
Methanogen homoaconitase large subunit 1
Probable 3-isopropylmalate dehydratase large subunit 3
Probable methanogen homoaconitase large subunit 3
Putative aconitate hydratase 1

Protein length

Unique protein length 865

Protein length distribution