Orthogroup:group_821


Homologs in group_821

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04120 FBDBKF_04120 Morganella morganii S1 ygfZ tRNA-modifying protein YgfZ
EHELCC_05410 EHELCC_05410 Morganella morganii S2 ygfZ tRNA-modifying protein YgfZ
NLDBIP_05730 NLDBIP_05730 Morganella morganii S4 ygfZ tRNA-modifying protein YgfZ
LHKJJB_02610 LHKJJB_02610 Morganella morganii S3 ygfZ tRNA-modifying protein YgfZ
HKOGLL_06085 HKOGLL_06085 Morganella morganii S5 ygfZ tRNA-modifying protein YgfZ
F4V73_RS08560 F4V73_RS08560 Morganella psychrotolerans ygfZ tRNA-modifying protein YgfZ
PMI_RS09945 PMI_RS09945 Proteus mirabilis HI4320 ygfZ tRNA-modifying protein YgfZ

Distribution of group_821 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_821 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_821

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_821.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ygfZ 7

Product

# Product Occurence
1 tRNA-modifying protein YgfZ 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0354 7 O Posttranslational modification, protein turnover, chaperones (O) Folate-binding protein YgfZ, synthesis and repair of Fe-S clusters

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06980 7 tRNA-modifying protein YgfZ - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01571 7 Aminomethyltransferase folate-binding domain
PF21130 7 YgfZ, beta-barrel domain

Annotations of the 88 SwissProt hits

Annotation Number of occurrences
Putative transferase CAF17 homolog, mitochondrial 1
Putative transferase CAF17, mitochondrial 3
Putative transferase caf-17, mitochondrial 1
Uncharacterized protein HI_0466 1
tRNA-modifying protein YgfZ 82

Protein length

Min length 327
Max length 328
Mean length (sd) 327.1 (0.4)
Median length 327.0

Protein length distribution