Orthogroup:group_775


Homologs in group_775

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03585 FBDBKF_03585 Morganella morganii S1 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
EHELCC_06950 EHELCC_06950 Morganella morganii S2 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
NLDBIP_07275 NLDBIP_07275 Morganella morganii S4 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
LHKJJB_06810 LHKJJB_06810 Morganella morganii S3 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
HKOGLL_04120 HKOGLL_04120 Morganella morganii S5 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
F4V73_RS11285 F4V73_RS11285 Morganella psychrotolerans glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
PMI_RS17880 PMI_RS17880 Proteus mirabilis HI4320 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC

Distribution of group_775 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_775 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_775

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_775.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 glpC 7

Product

# Product Occurence
1 anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0247 7 C Energy production and conversion (C) Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00113 7 glycerol-3-phosphate dehydrogenase subunit C Glycerophospholipid metabolism
Biosynthesis of secondary metabolites		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02754 7 Cysteine-rich domain
PF13183 7 4Fe-4S dicluster domain

Annotations of the 66 SwissProt hits

Annotation Number of occurrences
Anaerobic glycerol-3-phosphate dehydrogenase subunit C 3
D-2-hydroxyglutarate dehydrogenase 4
Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D 4
Fumarate reductase (CoM/CoB) subunit B 1
Fumarate reductase iron-sulfur subunit 2
Glycolate oxidase iron-sulfur subunit 1
H(2)/formate:CoB-CoM heterodisulfide,ferredoxin reductase subunit C1 1
H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit B 2
H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit C 2
Lactate utilization protein A 22
Lactate utilization protein A 1 8
Lactate utilization protein A 2 8
Lactate utilization protein B 1
NADH-quinone oxidoreductase subunit I 3
Probable glycolate oxidase iron-sulfur subunit 1
Uncharacterized iron-sulfur protein MJ0092 1
Uncharacterized iron-sulfur protein MMP1067 1
Uncharacterized protein YkgE 1

Protein length

Min length 397
Max length 398
Mean length (sd) 397.9 (0.4)
Median length 398.0

Protein length distribution