Orthogroup:group_706


Homologs in group_706

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03060 FBDBKF_03060 Morganella morganii S1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
EHELCC_07475 EHELCC_07475 Morganella morganii S2 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
NLDBIP_07800 NLDBIP_07800 Morganella morganii S4 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
LHKJJB_07335 LHKJJB_07335 Morganella morganii S3 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
HKOGLL_03595 HKOGLL_03595 Morganella morganii S5 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
F4V73_RS11860 F4V73_RS11860 Morganella psychrotolerans rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
PMI_RS18375 PMI_RS18375 Proteus mirabilis HI4320 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase

Distribution of group_706 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_706 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_706

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_706.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rsmI 7

Product

# Product Occurence
1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0313 7 J Translation, ribosomal structure and biogenesis (J) 16S rRNA C1402 (ribose-2'-O) methylase RsmI

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07056 7 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00590 7 Tetrapyrrole (Corrin/Porphyrin) Methylases
PF23016 7 RsmI C-terminal HTH domain

Annotations of the 42 SwissProt hits

Annotation Number of occurrences
Ribosomal RNA small subunit methyltransferase I 41
Ribosomal RNA small subunit methyltransferase I (Fragment) 1

Protein length

Min length 290
Max length 292
Mean length (sd) 290.3 (0.8)
Median length 290.0

Protein length distribution