Orthogroup:group_614


Homologs in group_614

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01940 FBDBKF_01940 Morganella morganii S1 kdsA 3-deoxy-8-phosphooctulonate synthase
EHELCC_02410 EHELCC_02410 Morganella morganii S2 kdsA 3-deoxy-8-phosphooctulonate synthase
NLDBIP_01050 NLDBIP_01050 Morganella morganii S4 kdsA 3-deoxy-8-phosphooctulonate synthase
LHKJJB_00985 LHKJJB_00985 Morganella morganii S3 kdsA 3-deoxy-8-phosphooctulonate synthase
HKOGLL_01025 HKOGLL_01025 Morganella morganii S5 kdsA 3-deoxy-8-phosphooctulonate synthase
F4V73_RS04285 F4V73_RS04285 Morganella psychrotolerans kdsA 3-deoxy-8-phosphooctulonate synthase
PMI_RS05280 PMI_RS05280 Proteus mirabilis HI4320 kdsA 3-deoxy-8-phosphooctulonate synthase

Distribution of group_614 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_614 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_614

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_614.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 kdsA 7

Product

# Product Occurence
1 3-deoxy-8-phosphooctulonate synthase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2877 7 M Cell wall/membrane/envelope biogenesis (M) 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01627 7 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Lipopolysaccharide biosynthesis
Metabolic pathways
Biosynthesis of nucleotide sugars		 CMP-KDO biosynthesis

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00793 7 DAHP synthetase I family

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG013466 1 2-dehydro-3-deoxyphosphooctonate aldolase VF0044 Immune modulation
VFG013470 6 2-dehydro-3-deoxyphosphooctonate aldolase VF0044 Immune modulation

Annotations of the 325 SwissProt hits

Annotation Number of occurrences
2-dehydro-3-deoxyphosphooctonate aldolase 317
2-dehydro-3-deoxyphosphooctonate aldolase 1 3
2-dehydro-3-deoxyphosphooctonate aldolase 2 3
Phospho-2-dehydro-3-deoxyheptonate aldolase 1
Protein AroA(G) 1

Protein length

Min length 283
Max length 284
Mean length (sd) 283.3 (0.5)
Median length 283.0

Protein length distribution