COG0046


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0046, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0046 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_537 FBDBKF_01230 233131 237018 -1 purL phosphoribosylformylglycinamidine synthase Morganella morganii S1
1 group_537 EHELCC_00315 71850 75737 1 purL phosphoribosylformylglycinamidine synthase Morganella morganii S2
2 group_537 NLDBIP_03145 604399 608286 -1 purL phosphoribosylformylglycinamidine synthase Morganella morganii S4
3 group_537 LHKJJB_04660 211640 215527 -1 purL phosphoribosylformylglycinamidine synthase Morganella morganii S3
4 group_537 HKOGLL_02385 72055 75942 1 purL phosphoribosylformylglycinamidine synthase Morganella morganii S5
5 group_537 F4V73_RS07270 1514011 1517934 -1 purL phosphoribosylformylglycinamidine synthase Morganella psychrotolerans
6 group_537 PMI_RS09255 2018372 2022262 -1 purL phosphoribosylformylglycinamidine synthase Proteus mirabilis HI4320