Orthogroup:group_567


Homologs in group_567

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01480 FBDBKF_01480 Morganella morganii S1 grcA autonomous glycyl radical cofactor GrcA
EHELCC_00065 EHELCC_00065 Morganella morganii S2 grcA autonomous glycyl radical cofactor GrcA
NLDBIP_03395 NLDBIP_03395 Morganella morganii S4 grcA autonomous glycyl radical cofactor GrcA
LHKJJB_04910 LHKJJB_04910 Morganella morganii S3 grcA autonomous glycyl radical cofactor GrcA
HKOGLL_02135 HKOGLL_02135 Morganella morganii S5 grcA autonomous glycyl radical cofactor GrcA
F4V73_RS01925 F4V73_RS01925 Morganella psychrotolerans grcA autonomous glycyl radical cofactor GrcA
PMI_RS09365 PMI_RS09365 Proteus mirabilis HI4320 grcA autonomous glycyl radical cofactor GrcA

Distribution of group_567 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_567 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_567

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_567.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 grcA 7

Product

# Product Occurence
1 autonomous glycyl radical cofactor GrcA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3445 7 H Coenzyme transport and metabolism (H) Autonomous glycyl radical cofactor GrcA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06866 7 autonomous glycyl radical cofactor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01228 7 Glycine radical

Annotations of the 128 SwissProt hits

Annotation Number of occurrences
(2S)-3-sulfopropanediol dehydratase 1
(2S)-3-sulfopropanediol sulfolyase 1
4-hydroxyphenylacetate decarboxylase glycyl radical subunit 5
Autonomous glycyl radical cofactor 92
Benzylsuccinate synthase alpha subunit 1
Choline trimethylamine-lyase 1
Formate acetyltransferase 16
Formate acetyltransferase (Fragment) 1
Formate acetyltransferase 1 1
Indoleacetate decarboxylase 1
Isethionate sulfite-lyase 4
PFL-like enzyme TdcE 1
Probable dehydratase PflD 1
Probable dehydratase YbiW 1
Trans-4-hydroxy-L-proline dehydratase 1

Protein length

Unique protein length 127

Protein length distribution