VFG043022


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG043022, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein flagellar basal body rod protein FlgB
VF ID VF0967
Category Motility
Protein ID NP_460145
Vf_category_id VFC0204

Occurence in the database

VFG043022 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_473 FBDBKF_00715 119906 120322 -1 flgB flagellar basal body rod protein FlgB Morganella morganii S1
1 group_473 EHELCC_00830 188546 188962 1 flgB flagellar basal body rod protein FlgB Morganella morganii S2
2 group_473 NLDBIP_02630 491174 491590 -1 flgB flagellar basal body rod protein FlgB Morganella morganii S4
3 group_473 LHKJJB_04145 98415 98831 -1 flgB flagellar basal body rod protein FlgB Morganella morganii S3
4 group_473 HKOGLL_02900 188751 189167 1 flgB flagellar basal body rod protein FlgB Morganella morganii S5