Orthogroup:group_548


Homologs in group_548

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01310 FBDBKF_01310 Morganella morganii S1 tssG type VI secretion system baseplate subunit TssG
EHELCC_00235 EHELCC_00235 Morganella morganii S2 tssG type VI secretion system baseplate subunit TssG
NLDBIP_03225 NLDBIP_03225 Morganella morganii S4 tssG type VI secretion system baseplate subunit TssG
LHKJJB_04740 LHKJJB_04740 Morganella morganii S3 tssG type VI secretion system baseplate subunit TssG
HKOGLL_02305 HKOGLL_02305 Morganella morganii S5 tssG type VI secretion system baseplate subunit TssG
F4V73_RS02360 F4V73_RS02360 Morganella psychrotolerans tssG type VI secretion system baseplate subunit TssG
PMI_RS03665 PMI_RS03665 Proteus mirabilis HI4320 tssG type VI secretion system baseplate subunit TssG

Distribution of group_548 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_548 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_548

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_548.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tssG 7

Product

# Product Occurence
1 type VI secretion system baseplate subunit TssG 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3520 7 U Intracellular trafficking, secretion, and vesicular transport (U) Predicted component of the type VI protein secretion system

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11895 7 type VI secretion system protein ImpH Biofilm formation - Pseudomonas aeruginosa -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06996 7 Type VI secretion, TssG

Protein length

Min length 341
Max length 345
Mean length (sd) 341.6 (1.5)
Median length 341.0

Protein length distribution