Orthogroup:group_516


Homologs in group_516

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01085 FBDBKF_01085 Morganella morganii S1 pbpC peptidoglycan glycosyltransferase PbpC
EHELCC_00460 EHELCC_00460 Morganella morganii S2 pbpC peptidoglycan glycosyltransferase PbpC
NLDBIP_03000 NLDBIP_03000 Morganella morganii S4 pbpC peptidoglycan glycosyltransferase PbpC
LHKJJB_04515 LHKJJB_04515 Morganella morganii S3 pbpC peptidoglycan glycosyltransferase PbpC
HKOGLL_02530 HKOGLL_02530 Morganella morganii S5 pbpC peptidoglycan glycosyltransferase PbpC
F4V73_RS07155 F4V73_RS07155 Morganella psychrotolerans pbpC peptidoglycan glycosyltransferase PbpC
PMI_RS09130 PMI_RS09130 Proteus mirabilis HI4320 pbpC peptidoglycan glycosyltransferase PbpC

Distribution of group_516 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_516 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_516

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_516.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pbpC 7

Product

# Product Occurence
1 peptidoglycan glycosyltransferase PbpC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4953 7 M Cell wall/membrane/envelope biogenesis (M) Membrane carboxypeptidase/penicillin-binding protein PbpC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05367 7 penicillin-binding protein 1C [EC:2.4.99.28] Peptidoglycan biosynthesis
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00905 7 Penicillin binding protein transpeptidase domain
PF00912 7 Transglycosylase
PF06832 7 Penicillin-Binding Protein C-terminus Family

Annotations of the 232 SwissProt hits

Annotation Number of occurrences
Biosynthetic peptidoglycan transglycosylase 167
Biosynthetic peptidoglycan transglycosylase (Fragment) 1
Monofunctional glycosyltransferase 18
Penicillin-binding protein 1A 32
Penicillin-binding protein 1A (Fragment) 1
Penicillin-binding protein 1A/1B 1
Penicillin-binding protein 1B 5
Penicillin-binding protein 1C 1
Penicillin-binding protein 1F 1
Penicillin-binding protein 2D 1
Penicillin-binding protein 2a 2
Penicillin-binding protein 4 1
Putative transglycosylase H16_A0665 1

Protein length

Min length 769
Max length 773
Mean length (sd) 769.6 (1.5)
Median length 769.0

Protein length distribution