COG4589


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4589, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
Function(s) descr. General function prediction only (R)

Occurence in the database

COG4589 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_441 FBDBKF_00435 66011 66937 1 ynbB putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase Morganella morganii S1
1 group_441 EHELCC_01110 241931 242857 -1 ynbB putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase Morganella morganii S2
2 group_441 NLDBIP_02350 437279 438205 1 ynbB putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase Morganella morganii S4
3 group_441 LHKJJB_03865 44520 45446 1 ynbB putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase Morganella morganii S3
4 group_441 HKOGLL_03180 242136 243062 -1 ynbB putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase Morganella morganii S5
5 group_441 F4V73_RS06410 1337200 1338126 1 phosphatidate cytidylyltransferase Morganella psychrotolerans
6 group_441 PMI_RS10815 2382213 2383148 1 phosphatidate cytidylyltransferase Proteus mirabilis HI4320