Orthogroup:group_514


Homologs in group_514

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01070 FBDBKF_01070 Morganella morganii S1 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
EHELCC_00475 EHELCC_00475 Morganella morganii S2 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
NLDBIP_02985 NLDBIP_02985 Morganella morganii S4 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
LHKJJB_04500 LHKJJB_04500 Morganella morganii S3 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
HKOGLL_02545 HKOGLL_02545 Morganella morganii S5 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
F4V73_RS07145 F4V73_RS07145 Morganella psychrotolerans - bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
PMI_RS09120 PMI_RS09120 Proteus mirabilis HI4320 - bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN

Distribution of group_514 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_514 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_514

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_514.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rlmN 5
2 - 2

Product

# Product Occurence
1 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0820 7 J Translation, ribosomal structure and biogenesis (J) Adenine C2-methylase RlmN of 23S rRNA A2503 and tRNA A37

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06941 7 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04055 7 Radical SAM superfamily
PF21016 7 Ribosomal RNA large subunit methyltransferase N-terminal domain

Annotations of the 517 SwissProt hits

Annotation Number of occurrences
Dual-specificity RNA methyltransferase RlmN 355
Dual-specificity RNA methyltransferase RlmN 1 1
Dual-specificity RNA methyltransferase RlmN 2 1
Probable dual-specificity RNA methyltransferase RlmN 156
Probable dual-specificity RNA methyltransferase RlmN 2 1
Probable dual-specificity RNA methyltransferase RlmN 3 1
Putative dual-specificity RNA methyltransferase RlmN 1
Ribosomal RNA large subunit methyltransferase N 1

Protein length

Min length 392
Max length 393
Mean length (sd) 392.1 (0.4)
Median length 392.0

Protein length distribution