Homologs in group_439

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00425 FBDBKF_00425 80.6 Morganella morganii S1 pgsA Phosphatidylglycerophosphate synthase
EHELCC_01120 EHELCC_01120 80.6 Morganella morganii S2 pgsA Phosphatidylglycerophosphate synthase
NLDBIP_02340 NLDBIP_02340 80.6 Morganella morganii S4 pgsA Phosphatidylglycerophosphate synthase
LHKJJB_03855 LHKJJB_03855 80.6 Morganella morganii S3 pgsA Phosphatidylglycerophosphate synthase
HKOGLL_03190 HKOGLL_03190 80.6 Morganella morganii S5 pgsA Phosphatidylglycerophosphate synthase
PMI_RS10805 PMI_RS10805 58.1 Proteus mirabilis HI4320 - CDP-alcohol phosphatidyltransferase family protein

Distribution of the homologs in the orthogroup group_439

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_439

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06400
Feature type CDS
Gene -
Product CDP-alcohol phosphatidyltransferase family protein
Location 1335868 - 1336536 (strand: 1)
Length 669 (nucleotides) / 222 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_439
Orthogroup size 7
N. genomes 7

Actions

Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0558 Lipid transport and metabolism (I) I Phosphatidylglycerophosphate synthase

Protein Sequence

MDPEIKDRRPIKARQTRWATASARWLQQRGATPNGISVASVVFALFAALAFFGALNSEITVLRILLFVLAALLVQGRLICNLLDGMVAVEGGLRSPVGAVFNDLPDRISDSLILIGVGYGLSGFITWTPELGWAAALMAVMTAYVRVLGGACEQPQKFLGPMAKQHRMALLTIIAVIACFLPADWAQSLFFIVLWVITLGAFWTTLRRTSVLMADLRKDNER

Flanking regions ( +/- flanking 50bp)

CTTATAGTATCAACAGCGTAATCTTCAAATATTCACATAACGGAAAAGATATGGATCCTGAAATCAAGGACAGACGTCCGATAAAAGCCCGCCAGACCCGCTGGGCAACAGCAAGCGCCCGATGGTTACAACAGCGCGGTGCTACACCAAACGGCATTTCAGTGGCAAGCGTTGTCTTCGCCCTGTTCGCCGCACTCGCTTTTTTCGGCGCACTGAACAGTGAGATAACCGTACTGCGCATACTGCTGTTTGTACTGGCGGCGTTGCTGGTTCAGGGACGGCTTATCTGTAATCTCCTCGATGGCATGGTGGCGGTGGAAGGCGGGCTGCGCAGCCCGGTCGGGGCGGTATTTAATGATTTACCGGATCGCATATCAGATTCACTGATCCTCATTGGTGTGGGTTACGGGCTGTCCGGGTTTATCACATGGACACCGGAGCTTGGCTGGGCTGCCGCACTGATGGCGGTCATGACCGCCTATGTCCGCGTCCTCGGCGGCGCCTGTGAACAACCACAAAAATTTCTCGGCCCGATGGCAAAACAGCACCGGATGGCACTGCTCACTATCATTGCCGTTATCGCCTGTTTTCTGCCTGCGGACTGGGCTCAGAGCTTATTTTTCATCGTGTTATGGGTAATCACACTGGGCGCATTCTGGACGACACTGCGCCGCACATCCGTATTGATGGCCGATTTACGTAAGGATAACGAAAGATGACCCGCAAAAAGATTTCACCGGATAAGAAAATCGTCTCCGCGCTGCTGGTA