COG0558


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0558, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphatidylglycerophosphate synthase
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG0558 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_439 FBDBKF_00425 64676 65347 1 pgsA Phosphatidylglycerophosphate synthase Morganella morganii S1
1 group_2096 FBDBKF_15770 6543 7091 1 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Morganella morganii S1
2 group_2974 FBDBKF_16580 45913 46542 -1 pgsA Phosphatidylglycerophosphate synthase Morganella morganii S1
3 group_439 EHELCC_01120 243521 244192 -1 pgsA Phosphatidylglycerophosphate synthase Morganella morganii S2
4 group_2974 EHELCC_08445 162899 163528 -1 pgsA Phosphatidylglycerophosphate synthase Morganella morganii S2
5 group_2096 EHELCC_17685 40472 41020 1 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Morganella morganii S2
6 group_439 NLDBIP_02340 435944 436615 1 pgsA Phosphatidylglycerophosphate synthase Morganella morganii S4
7 group_2974 NLDBIP_08770 162899 163528 -1 pgsA Phosphatidylglycerophosphate synthase Morganella morganii S4
8 group_2096 NLDBIP_19355 16417 16965 1 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Morganella morganii S4
9 group_439 LHKJJB_03855 43185 43856 1 pgsA Phosphatidylglycerophosphate synthase Morganella morganii S3
10 group_2974 LHKJJB_05495 93631 94260 1 pgsA Phosphatidylglycerophosphate synthase Morganella morganii S3
11 group_2096 LHKJJB_18125 40472 41020 1 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Morganella morganii S3
12 group_439 HKOGLL_03190 243726 244397 -1 pgsA Phosphatidylglycerophosphate synthase Morganella morganii S5
13 group_2974 HKOGLL_05420 147490 148119 -1 pgsA Phosphatidylglycerophosphate synthase Morganella morganii S5
14 group_2096 HKOGLL_18955 1034 1582 -1 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Morganella morganii S5
15 group_2974 F4V73_RS03110 665450 666079 -1 CDP-alcohol phosphatidyltransferase family protein Morganella psychrotolerans
16 group_439 F4V73_RS06400 1335868 1336536 1 CDP-alcohol phosphatidyltransferase family protein Morganella psychrotolerans
17 group_2096 F4V73_RS07920 1649931 1650479 -1 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Morganella psychrotolerans
18 group_2096 PMI_RS07395 1614066 1614614 -1 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Proteus mirabilis HI4320
19 group_439 PMI_RS10805 2380875 2381543 1 CDP-alcohol phosphatidyltransferase family protein Proteus mirabilis HI4320