Orthogroup:group_4904



Homologs in group_4904

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS06115 PMI_RS06115 Proteus mirabilis HI4320 - TolC family protein

Distribution of group_4904 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_4904

Orthogroup content: 1 members

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This page summarizes the annotation of all members of the orthologous group group_4904.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 1

Product

# Product Occurence
1 TolC family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1538 1 M Cell wall/membrane/envelope biogenesis (M) Outer membrane protein TolC

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02321 1 Outer membrane efflux protein

Annotations of the 25 SwissProt hits

Annotation Number of occurrences
Antibiotic efflux pump outer membrane protein ArpC 1
Cation efflux system protein CusC 3
Multidrug resistance outer membrane protein MdtP 4
Multidrug/solvent efflux pump outer membrane protein MepC 1
Outer membrane protein OprJ 1
Outer membrane protein OprM 1
Outer membrane protein TolC 3
Probable efflux pump outer membrane protein SepC 1
Probable efflux pump outer membrane protein TtgC 1
Probable outer membrane lipoprotein SilC 1
Protein CyaE 2
Solvent efflux pump outer membrane protein SrpC 1
Toluene efflux pump outer membrane protein TtgC 1
Toluene efflux pump outer membrane protein TtgF 1
Toluene efflux pump outer membrane protein TtgI 1
Toxin and drug export protein A 1
Uncharacterized protein HI_1462 1