Orthogroup:group_487



Homologs in group_487

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00820 FBDBKF_00820 Morganella morganii S1 flhD flagellar transcriptional regulator FlhD
EHELCC_00725 EHELCC_00725 Morganella morganii S2 flhD flagellar transcriptional regulator FlhD
NLDBIP_02735 NLDBIP_02735 Morganella morganii S4 flhD flagellar transcriptional regulator FlhD
LHKJJB_04250 LHKJJB_04250 Morganella morganii S3 flhD flagellar transcriptional regulator FlhD
HKOGLL_02795 HKOGLL_02795 Morganella morganii S5 flhD flagellar transcriptional regulator FlhD
F4V73_RS06815 F4V73_RS06815 Morganella psychrotolerans flhD flagellar transcriptional regulator FlhD
PMI_RS08165 PMI_RS08165 Proteus mirabilis HI4320 flhD flagellar transcriptional regulator FlhD

Distribution of group_487 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_487 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_487

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_487.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 flhD 7

Product

# Product Occurence
1 flagellar transcriptional regulator FlhD 7

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02403 7 flagellar transcriptional activator FlhD Two-component system
Quorum sensing
Biofilm formation - Escherichia coli
Flagellar assembly
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05247 7 Flagellar transcriptional activator (FlhD)

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG002359 1 flagellar transcriptional activator FlhD VF0394 Motility
VFG043046 1 regulator of flagellar biosynthesis VF0967 Motility
VFG043098 5 flagellar transcriptional regulator FlhD VF1154 Motility

Annotations of the 71 SwissProt hits

Annotation Number of occurrences
Flagellar transcriptional regulator FlhD 71

Protein length

Min length 116
Max length 117
Mean length (sd) 116.9 (0.4)
Median length 117.0

Protein length distribution