Orthogroup:group_475


Homologs in group_475

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08180 FBDBKF_08180 Morganella morganii S1 ilvA threonine ammonia-lyase, biosynthetic
EHELCC_13345 EHELCC_13345 Morganella morganii S2 ilvA threonine ammonia-lyase, biosynthetic
NLDBIP_13685 NLDBIP_13685 Morganella morganii S4 ilvA threonine ammonia-lyase, biosynthetic
LHKJJB_12870 LHKJJB_12870 Morganella morganii S3 ilvA threonine ammonia-lyase, biosynthetic
HKOGLL_12160 HKOGLL_12160 Morganella morganii S5 ilvA threonine ammonia-lyase, biosynthetic
F4V73_RS18710 F4V73_RS18710 Morganella psychrotolerans ilvA threonine ammonia-lyase, biosynthetic
PMI_RS16420 PMI_RS16420 Proteus mirabilis HI4320 ilvA threonine ammonia-lyase, biosynthetic

Distribution of group_475 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_475 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_475

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_475.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ilvA 7

Product

# Product Occurence
1 threonine ammonia-lyase, biosynthetic 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1171 7 E Amino acid transport and metabolism (E) Threonine deaminase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00291 7 Pyridoxal-phosphate dependent enzyme
PF00585 7 C-terminal regulatory domain of Threonine dehydratase

Annotations of the 215 SwissProt hits

Annotation Number of occurrences
Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase 2, mitochondrial 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase, mitochondrial 1
Catabolic L-serine/threonine dehydratase 1
Cystathionine beta-synthase 8
Cysteine synthase 21
Cysteine synthase 1 3
Cysteine synthase 3 1
Cysteine synthase B 4
Cysteine synthase B (Fragment) 1
Cysteine synthase, chloroplastic/chromoplastic 4
D-cysteine desulfhydrase 42
Diaminopropionate ammonia-lyase 4
L-3-cyanoalanine synthase 1, mitochondrial 1
L-3-cyanoalanine synthase 2, mitochondrial 1
L-Threonine dehydratase biosynthetic IlvA 1
L-serine dehydratase 6
L-serine dehydratase/L-threonine deaminase 4
L-threo-3-hydroxyaspartate ammonia-lyase 2
L-threonine ammonia-lyase 2
L-threonine dehydratase biosynthetic IlvA 25
L-threonine dehydratase catabolic TdcB 14
O-acetylserine dependent cystathionine beta-synthase 1
O-ureido-L-serine synthase 1
Phenylserine dehydratase 1
Probable D-serine dehydratase 7
Probable cysteine synthase 1
Putative cysteine synthase 1
Putative threonine dehydratase 1
Putative truncated L-serine dehydratase SDL1 1
Putative truncated L-serine dehydratase YIL168W 1
S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent), chloroplastic 1
S-sulfocysteine synthase 1
Serine dehydratase-like 3
Serine racemase 9
Threonine dehydratase 1
Threonine dehydratase 1 biosynthetic, chloroplastic 1
Threonine dehydratase 2 biosynthetic, chloroplastic 1
Threonine dehydratase biosynthetic, chloroplastic 2
Threonine dehydratase biosynthetic, chloroplastic (Fragment) 1
Threonine dehydratase, mitochondrial 3
Threonine dehydratase-like protein AKTS1-1 1
Threonine synthase 11
Tryptophan synthase beta chain 12
Tryptophan synthase beta chain 1 2
beta-hydroxyaspartate dehydratase 1

Protein length

Min length 521
Max length 524
Mean length (sd) 522.1 (0.9)
Median length 522.0

Protein length distribution