Orthogroup:group_4270


Homologs in group_4270

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS18555 PMI_RS18555 Proteus mirabilis HI4320 - VirB3 family type IV secretion system protein

Distribution of group_4270 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_4270

Orthogroup content: 1 members

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This page summarizes the annotation of all members of the orthologous group group_4270.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 1

Product

# Product Occurence
1 VirB3 family type IV secretion system protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3451 1 U Intracellular trafficking, secretion, and vesicular transport (U) Type IV secretory pathway, VirB4 component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03199 1 type IV secretion system protein VirB4 [EC:7.4.2.8] Bacterial secretion system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03135 1 CagE, TrbE, VirB family, component of type IV transporter system
PF05101 1 Type IV secretory pathway, VirB3-like protein

Annotations of the 16 SwissProt hits

Annotation Number of occurrences
Conjugal transfer protein TrbE 1
Probable conjugal transfer protein TrbE part 2 1
Protein virB4 3
Type IV secretion system protein CagE 2
Type IV secretion system protein PtlC 1
Type IV secretion system protein PtlC homolog 2
Type IV secretion system protein virB4 6