Orthogroup:group_415



Homologs in group_415

Help

8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18070 FBDBKF_18070 Morganella morganii S1 dcm DNA-cytosine methylase
EHELCC_16770 EHELCC_16770 Morganella morganii S2 dcm DNA-cytosine methylase
NLDBIP_17680 NLDBIP_17680 Morganella morganii S4 dcm DNA-cytosine methylase
LHKJJB_17600 LHKJJB_17600 Morganella morganii S3 dcm DNA-cytosine methylase
HKOGLL_17415 HKOGLL_17415 Morganella morganii S5 dcm DNA-cytosine methylase
F4V73_RS02270 F4V73_RS02270 Morganella psychrotolerans - DNA cytosine methyltransferase
F4V73_RS10160 F4V73_RS10160 Morganella psychrotolerans - DNA cytosine methyltransferase
F4V73_RS10225 F4V73_RS10225 Morganella psychrotolerans - DNA cytosine methyltransferase

Distribution of group_415 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_415 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_415

Orthogroup content: 8 members

Help

This page summarizes the annotation of all members of the orthologous group group_415.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dcm 5
2 - 3

Product

# Product Occurence
1 DNA-cytosine methylase 5
2 DNA cytosine methyltransferase 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0270 8 L Replication, recombination and repair (L) DNA-cytosine methylase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00558 8 DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] Cysteine and methionine metabolism
Metabolic pathways
MicroRNAs in cancer
Methionine degradation

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00145 8 C-5 cytosine-specific DNA methylase
PF18284 1 DNA methylase N-terminal domain

Annotations of the 107 SwissProt hits

Annotation Number of occurrences
DNA (cytosine-5)-methyltransferase 1
DNA (cytosine-5)-methyltransferase 1 7
DNA (cytosine-5)-methyltransferase 1A 1
DNA (cytosine-5)-methyltransferase 1B 1
DNA (cytosine-5)-methyltransferase 2 2
DNA (cytosine-5)-methyltransferase 3 2
DNA (cytosine-5)-methyltransferase 3A 4
DNA (cytosine-5)-methyltransferase 4 1
DNA (cytosine-5)-methyltransferase CMT1 1
DNA (cytosine-5)-methyltransferase CMT2 2
DNA (cytosine-5)-methyltransferase CMT3 2
DNA (cytosine-5)-methyltransferase DRM1 1
DNA (cytosine-5)-methyltransferase DRM1A 1
DNA (cytosine-5)-methyltransferase DRM2 2
DNA (cytosine-5)-methyltransferase PliMCI 1
DNA (cytosine-5-)-methyltransferase M.ApeKI 1
DNA N-6-adenine-methyltransferase 1
DNA-cytosine methyltransferase 2
Orphan methyltransferase M.Phi3TI 1
Orphan methyltransferase M.Rho11sI 1
Orphan methyltransferase M.SPBetaI 1
Orphan methyltransferase M.SPRI 1
Orphan methyltransferase M.SssI 1
Putative DNA (cytosine-5)-methyltransferase CMT1 1
Putative type II methyltransferase M.BsuMIIP 1
Putative type II methyltransferase M.MJ0563P 1
Putative type II methyltransferase M.MjaORF1200P 1
Putative type II methyltransferase M.OihORF3336P 1
Type II methlytransferase M2.HgaI 1
Type II methylase M.HgiDII 1
Type II methylase M.HgiEI 1
Type II methyltransferase M.AgeI 1
Type II methyltransferase M.AluI 1
Type II methyltransferase M.ApaLI 1
Type II methyltransferase M.AplI 1
Type II methyltransferase M.AquIA 1
Type II methyltransferase M.AquIB 1
Type II methyltransferase M.BanI 1
Type II methyltransferase M.BbvI 1
Type II methyltransferase M.BepI 1
Type II methyltransferase M.Bpa9945I 1
Type II methyltransferase M.Bsp6I 1
Type II methyltransferase M.BspRI 1
Type II methyltransferase M.BsuFI 1
Type II methyltransferase M.BsuRI 1
Type II methyltransferase M.CviJI 1
Type II methyltransferase M.DdeI 1
Type II methyltransferase M.DsaV 1
Type II methyltransferase M.Eco47II 1
Type II methyltransferase M.EcoRII 1
Type II methyltransferase M.FnuDI 1
Type II methyltransferase M.HaeII 1
Type II methyltransferase M.HaeIII 1
Type II methyltransferase M.HgiBI 1
Type II methyltransferase M.HgiCI 1
Type II methyltransferase M.HgiCII 1
Type II methyltransferase M.HgiDI 1
Type II methyltransferase M.HgiGI (Fragment) 1
Type II methyltransferase M.HhaI 1
Type II methyltransferase M.HindV 1
Type II methyltransferase M.HpaII 1
Type II methyltransferase M.MspI 1
Type II methyltransferase M.MthTI 1
Type II methyltransferase M.NaeI 1
Type II methyltransferase M.NgoBI 1
Type II methyltransferase M.NgoBV 1
Type II methyltransferase M.NgoFVII 1
Type II methyltransferase M.NgoMIV 1
Type II methyltransferase M.NgoPII 1
Type II methyltransferase M.NlaIV 1
Type II methyltransferase M.NlaX 1
Type II methyltransferase M.NmeDI 1
Type II methyltransferase M.PspPI 1
Type II methyltransferase M.SacI 1
Type II methyltransferase M.Sau3AI 1
Type II methyltransferase M.Sau96I 1
Type II methyltransferase M.SinI 1
Type II methyltransferase M.SsoII 1
Type II methyltransferase M.XorII 1
Type II methyltransferase M1.BsuMI 1
Type II methyltransferase M1.HgaI 1
Type II methyltransferase M1.HphI 1
Type II methyltransferase M1.ScrFI 1
Type II methyltransferase M2.BsuMI 1
Type II methyltransferase M2.ScrFI 1
tRNA (cytosine(38)-C(5))-methyltransferase 6
tRNA (cytosine(38)-C(5))-methyltransferase 2 1

Protein length

Min length 362
Max length 475
Mean length (sd) 384.4 (36.8)
Median length 373.0

Protein length distribution