Orthogroup:group_396


Homologs in group_396

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20020 FBDBKF_20020 Morganella morganii S1 - Molecular chaperone
EHELCC_03510 EHELCC_03510 Morganella morganii S2 - Molecular chaperone
NLDBIP_03510 NLDBIP_03510 Morganella morganii S4 - Molecular chaperone
LHKJJB_09340 LHKJJB_09340 Morganella morganii S3 - Molecular chaperone
HKOGLL_09635 HKOGLL_09635 Morganella morganii S5 - Molecular chaperone
F4V73_RS01040 F4V73_RS01040 Morganella psychrotolerans - fimbria/pilus periplasmic chaperone
PMI_RS07100 PMI_RS07100 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone

Distribution of group_396 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_396 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_396

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_396.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 Molecular chaperone 5
2 fimbria/pilus periplasmic chaperone 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3121 7 W Extracellular structures (W) P pilus assembly protein, chaperone PapD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07346 1 fimbrial chaperone protein Two-component system -
K07353 6 fimbrial chaperone protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00345 7 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 7 Pili assembly chaperone PapD, C-terminal domain

Annotations of the 38 SwissProt hits

Annotation Number of occurrences
Chaperone protein AfaB 1
Chaperone protein AggD 1
Chaperone protein CS3-1 1
Chaperone protein ClpE 1
Chaperone protein CssC 2
Chaperone protein FaeE 1
Chaperone protein FanE 1
Chaperone protein FimB/FhaD 1
Chaperone protein FimC 3
Chaperone protein FocC 2
Chaperone protein HifB 2
Chaperone protein LpfB 1
Chaperone protein MrkB 1
Chaperone protein MyfB 1
Chaperone protein NfaE 1
Chaperone protein PapD 1
Chaperone protein PmfD 1
Chaperone protein PrsD (Fragment) 1
Chaperone protein PsaB 2
Chaperone protein SefB 1
Chaperone protein caf1M 1
Probable fimbrial chaperone LpfB 1
Probable fimbrial chaperone SfmC 1
Probable fimbrial chaperone YadV 1
Probable fimbrial chaperone YehC 1
Probable fimbrial chaperone YfcS 1
Probable fimbrial chaperone YraI 1
Probable fimbrial chaperone protein ElfD 2
Uncharacterized fimbrial chaperone YbgP 1
Uncharacterized fimbrial chaperone YcbF 1
Uncharacterized fimbrial chaperone YqiH 1

Protein length

Min length 230
Max length 237
Mean length (sd) 233.1 (2.0)
Median length 233.0

Protein length distribution