Homologs in group_396

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20020 FBDBKF_20020 41.7 Morganella morganii S1 - Molecular chaperone
EHELCC_03510 EHELCC_03510 41.7 Morganella morganii S2 - Molecular chaperone
NLDBIP_03510 NLDBIP_03510 41.7 Morganella morganii S4 - Molecular chaperone
LHKJJB_09340 LHKJJB_09340 41.7 Morganella morganii S3 - Molecular chaperone
HKOGLL_09635 HKOGLL_09635 41.7 Morganella morganii S5 - Molecular chaperone
PMI_RS07100 PMI_RS07100 44.7 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone

Distribution of the homologs in the orthogroup group_396

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_396

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8X5E4 9.59e-67 209 48 4 219 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
P75856 2.27e-66 207 48 4 219 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
P59590 7.47e-64 201 43 0 229 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P31697 9.91e-64 201 43 0 229 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P62609 1.94e-61 195 42 1 222 1 focC Chaperone protein FocC Escherichia coli
P62610 1.94e-61 195 42 1 222 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P37923 4.91e-61 194 48 3 226 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P77249 9.75e-58 186 45 2 219 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
P42914 1.26e-44 152 37 3 226 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
Q8X5K6 5.78e-40 140 36 4 231 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P43661 5.34e-34 125 36 5 201 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P53520 1.13e-29 114 33 8 227 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
P75749 7.39e-28 109 32 6 204 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P15319 9.58e-28 108 34 10 230 1 papD Chaperone protein PapD Escherichia coli
P46004 2.98e-27 107 32 4 211 3 aggD Chaperone protein AggD Escherichia coli
P35757 5.03e-26 104 33 11 236 3 hifB Chaperone protein HifB Haemophilus influenzae
P45991 2.08e-25 102 32 10 237 3 hifB Chaperone protein HifB Haemophilus influenzae
P77616 2.09e-25 103 34 10 217 3 yqiH Uncharacterized fimbrial chaperone YqiH Escherichia coli (strain K12)
P33409 3.8e-25 102 29 5 228 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P21646 8.41e-25 100 32 8 217 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P26926 2.63e-24 100 31 6 220 1 caf1M Chaperone protein caf1M Yersinia pestis
P53516 3.3e-23 97 33 4 192 3 afaB Chaperone protein AfaB Escherichia coli
P25402 9.77e-23 95 32 9 230 3 fanE Chaperone protein FanE Escherichia coli
P15483 1.15e-22 95 30 7 237 3 None Chaperone protein CS3-1 Escherichia coli
P33128 2.8e-21 92 28 7 220 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
P77599 8.08e-21 90 33 5 196 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
P33342 8.71e-21 90 28 7 223 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
P33387 1.41e-19 87 30 5 209 3 sefB Chaperone protein SefB Salmonella enteritidis
P69966 3.29e-19 87 29 9 231 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 3.29e-19 87 29 9 231 3 psaB Chaperone protein PsaB Yersinia pestis
P40876 5.36e-19 85 30 8 232 2 ycbF Uncharacterized fimbrial chaperone YcbF Escherichia coli (strain K12)
P46738 9.25e-19 85 31 4 192 3 nfaE Chaperone protein NfaE Escherichia coli
P25401 1.56e-17 82 27 5 204 1 faeE Chaperone protein FaeE Escherichia coli
Q05433 1.88e-17 82 27 5 204 3 clpE Chaperone protein ClpE Escherichia coli
P33407 1.2e-16 80 27 7 219 3 myfB Chaperone protein MyfB Yersinia enterocolitica
P53519 1.31e-11 65 27 9 229 3 cssC Chaperone protein CssC Escherichia coli
P53518 3.26e-11 64 25 9 236 3 cssC Chaperone protein CssC Escherichia coli
P42183 6.51e-06 47 33 5 108 3 prsD Chaperone protein PrsD (Fragment) Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01040
Feature type CDS
Gene -
Product fimbria/pilus periplasmic chaperone
Location 222170 - 222883 (strand: 1)
Length 714 (nucleotides) / 237 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_396
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07346 fimbrial chaperone protein Two-component system -

Protein Sequence

MMNINIKLIKKPLITLLALLSMSPVFSVYASEYGGVALGSTRLIYPIGEKQINLPISNSDKNKVFLIQSWVSNEDGKKTDDFIVTPPLFTLNQNSENILRIIYAGDENLPTDRETLFYLNSKAIPSVKKEDMNGNSLQIATQSVIKLFMRPAGLSFPIDKIPGALRCQIKDNSVLIENPTPYYVTLVNIKSGAESLPGTMASPFTTVTLPLPAHNNKSVSFQTVNDYGATTSSINCP

Flanking regions ( +/- flanking 50bp)

TGTTATTAGGGGGGAGTATTTTTATGGCATAGCGACTGGCAGACAACTATATGATGAACATCAATATTAAATTAATAAAAAAACCTCTGATTACGTTATTGGCCTTATTGAGCATGTCCCCTGTCTTCTCTGTATACGCCAGTGAATATGGTGGTGTTGCATTAGGATCAACCAGGCTGATTTATCCTATTGGTGAAAAACAAATAAATTTACCAATCTCAAATTCGGATAAAAATAAAGTTTTTCTAATTCAGTCATGGGTTAGTAATGAAGACGGAAAAAAAACGGATGATTTTATAGTTACACCACCATTGTTTACGCTAAACCAAAATAGTGAAAATATTTTACGTATTATTTATGCTGGTGATGAAAACTTACCAACAGATAGAGAAACATTATTTTATCTTAATAGTAAAGCTATTCCTTCAGTCAAAAAAGAAGATATGAACGGAAATTCTTTACAGATAGCGACGCAAAGTGTTATTAAATTATTTATGCGTCCTGCCGGACTTAGTTTTCCGATTGATAAGATCCCGGGCGCCCTGCGTTGCCAGATTAAAGATAATAGTGTGTTAATTGAAAATCCGACACCTTATTATGTAACATTAGTTAATATTAAATCAGGTGCAGAATCTTTACCCGGTACAATGGCATCACCATTTACCACGGTAACATTACCTCTGCCTGCTCATAATAATAAGTCAGTATCATTTCAAACAGTAAATGATTATGGAGCAACGACATCCAGTATTAATTGTCCGTGATAATAAATATAAGGGAGTTCCTGGCATGGCCAGTTCCTCTGTAAATAGTA