Orthogroup:group_394


Homologs in group_394

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15110 FBDBKF_15110 Morganella morganii S1 fadE acyl-CoA dehydrogenase FadE
EHELCC_11135 EHELCC_11135 Morganella morganii S2 fadE acyl-CoA dehydrogenase FadE
NLDBIP_11480 NLDBIP_11480 Morganella morganii S4 fadE acyl-CoA dehydrogenase FadE
LHKJJB_11340 LHKJJB_11340 Morganella morganii S3 fadE acyl-CoA dehydrogenase FadE
HKOGLL_09950 HKOGLL_09950 Morganella morganii S5 fadE acyl-CoA dehydrogenase FadE
F4V73_RS12340 F4V73_RS12340 Morganella psychrotolerans fadE acyl-CoA dehydrogenase FadE
PMI_RS01665 PMI_RS01665 Proteus mirabilis HI4320 fadE acyl-CoA dehydrogenase FadE
PMI_RS13080 PMI_RS13080 Proteus mirabilis HI4320 caiA crotonobetainyl-CoA dehydrogenase

Distribution of group_394 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_394 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_394

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_394.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fadE 7
2 caiA 1

Product

# Product Occurence
1 acyl-CoA dehydrogenase FadE 7
2 crotonobetainyl-CoA dehydrogenase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1960 8 I Lipid transport and metabolism (I) Acyl-CoA dehydrogenase related to the alkylation response protein AidB

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06445 7 acyl-CoA dehydrogenase [EC:1.3.99.-] Fatty acid degradation
Metabolic pathways
Fatty acid metabolism		 beta-Oxidation
K08297 1 crotonobetainyl-CoA dehydrogenase [EC:1.3.8.13] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00441 8 Acyl-CoA dehydrogenase, C-terminal domain
PF02770 1 Acyl-CoA dehydrogenase, middle domain
PF02771 8 Acyl-CoA dehydrogenase, N-terminal domain
PF09317 7 Acyl-CoA dehydrogenase, C-terminal, bacterial type

Annotations of the 179 SwissProt hits

Annotation Number of occurrences
(2S)-methylsuccinyl-CoA dehydrogenase 1
(R)-benzylsuccinyl-CoA dehydrogenase 1
2-methylacyl-CoA dehydrogenase, mitochondrial 1
3-(aryl)acrylate reductase 1
3-methylmercaptopropionyl-CoA dehydrogenase 2
3-sulfinopropanoyl-CoA desulfinase 4
Acryloyl-CoA reductase (NADH) 1
Acyl-CoA dehydrogenase 2
Acyl-CoA dehydrogenase AFT10-1 1
Acyl-CoA dehydrogenase FadE12 1
Acyl-CoA dehydrogenase FadE26 1
Acyl-CoA dehydrogenase FadE27 1
Acyl-CoA dehydrogenase FadE28 1
Acyl-CoA dehydrogenase FadE29 1
Acyl-CoA dehydrogenase FadE34 1
Acyl-CoA dehydrogenase IpdE1 2
Acyl-CoA dehydrogenase IpdE2 1
Acyl-CoA dehydrogenase apdG 1
Acyl-CoA dehydrogenase fadE12 2
Acyl-CoA dehydrogenase family member 10 2
Acyl-CoA dehydrogenase family member 11 5
Acyl-CoA dehydrogenase, short-chain specific 2
Acyl-[acyl-carrier-protein] dehydrogenase MbtN 5
Acyl-coenzyme A dehydrogenase 5
Acyl-coenzyme A oxidase 4, peroxisomal 1
Amino sugar nitrososynthase RubN8 1
Benzylmalonyl-CoA dehydrogenase 1
Broad-specificity linear acyl-CoA dehydrogenase FadE5 2
Butyryl-CoA dehydrogenase Swol_1933 1
Butyryl-CoA dehydrogenase Swol_2052 1
Caffeyl-CoA reductase-Etf complex subunit CarC 1
Complex I assembly factor ACAD9, mitochondrial 3
Crotonobetainyl-CoA reductase 44
Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase 2
Cyclohexane-1-carbonyl-CoA dehydrogenase 2
Glutaryl-CoA dehydrogenase 1
Glutaryl-CoA dehydrogenase, mitochondrial 5
Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) 1
Isobutyryl-CoA dehydrogenase, mitochondrial 4
Isovaleryl-CoA dehydrogenase, mitochondrial 8
L-prolyl-[peptidyl-carrier protein] dehydrogenase 3
Long-chain specific acyl-CoA dehydrogenase, mitochondrial 5
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial 8
Probable acyl-CoA dehydrogenase 1
Probable acyl-CoA dehydrogenase 6 1
Probable acyl-CoA dehydrogenase FadE10 3
Probable acyl-CoA dehydrogenase FadE2 1
Probable acyl-CoA dehydrogenase FadE25 1
Probable acyl-CoA dehydrogenase IBR3 1
Probable acyl-CoA dehydrogenase YdiO 3
Probable acyl-CoA dehydrogenase YngJ 1
Probable acyl-CoA dehydrogenase fadE25 3
Probable glutaryl-CoA dehydrogenase, mitochondrial 1
Probable medium-chain specific acyl-CoA dehydrogenase 1, mitochondrial 1
Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial 1
Probable medium-chain specific acyl-CoA dehydrogenase 2, mitochondrial 1
Probable short/branched chain specific acyl-CoA dehydrogenase 1
Protein HemX (Fragment) 1
Putative acyl-CoA dehydrogenase AidB 1
Putative acyl-CoA dehydrogenase FadE17 1
Putative acyl-CoA dehydrogenase YdbM 1
Short-chain specific acyl-CoA dehydrogenase, mitochondrial 6
Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial 5
Very long-chain specific acyl-CoA dehydrogenase, mitochondrial 5

Protein length

Min length 380
Max length 816
Mean length (sd) 761.4 (154.1)
Median length 816.0

Protein length distribution