Orthogroup:group_3860



Homologs in group_3860

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2 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS17225 F4V73_RS17225 Morganella psychrotolerans rfaL O-antigen ligase RfaL
PMI_RS15640 PMI_RS15640 Proteus mirabilis HI4320 rfaL O-antigen ligase RfaL

Distribution of group_3860 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3860

Orthogroup content: 2 members

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This page summarizes the annotation of all members of the orthologous group group_3860.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rfaL 2

Product

# Product Occurence
1 O-antigen ligase RfaL 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3307 2 M Cell wall/membrane/envelope biogenesis (M) O-antigen ligase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02847 1 O-antigen ligase [EC:2.4.99.26] Lipopolysaccharide biosynthesis
Metabolic pathways
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04932 2 O-Antigen ligase

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
O-antigen ligase 1

Protein length

Min length 413
Max length 422
Mean length (sd) 417.5 (6.4)
Median length 417.5

Protein length distribution