Homologs in group_3848

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS10105 F4V73_RS10105 28.2 Morganella psychrotolerans - helix-turn-helix domain-containing protein

Distribution of the homologs in the orthogroup group_3848

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3848

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07720
Feature type CDS
Gene -
Product helix-turn-helix domain-containing protein
Location 1685395 - 1686024 (strand: -1)
Length 630 (nucleotides) / 209 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3848
Orthogroup size 2
N. genomes 2

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Genomic region

Protein Sequence

MNSVIQKRTSQQLSVERVAVLERMTVLTKELVNELAEKKSLASALKMSDNELAQLIFETQLIRSSAISPREQRKIARLNEGAIKFSERLKELGGTCRASQAAAILGVKRQTINNRLKANKLLAVKMGGEYRLPIFQFDGNRLVDGLDEILILLDGLSSTTKVSFLTSMYFFEDEQDINVIDALKKYGRMSEQMQEIIHQAKLFGKHISN

Flanking regions ( +/- flanking 50bp)

TATACACTTTACTCACTATATAATGAATAAAATGTAAAAAAGAGGTGGGTATGAACAGCGTAATACAAAAACGAACATCACAACAATTATCGGTAGAGAGAGTGGCTGTTCTAGAAAGAATGACTGTTCTTACAAAAGAATTGGTTAATGAATTAGCAGAGAAGAAAAGTTTAGCAAGTGCTTTAAAAATGAGTGATAACGAATTGGCTCAGTTAATTTTTGAAACTCAACTGATACGTTCGTCTGCAATTTCACCAAGAGAACAACGTAAAATAGCCCGTTTAAACGAAGGTGCTATTAAGTTTTCTGAACGGCTAAAAGAGCTTGGAGGCACATGTAGAGCTAGCCAAGCTGCAGCTATTTTGGGAGTAAAACGTCAAACGATTAATAATCGGTTAAAGGCTAATAAACTATTAGCGGTTAAAATGGGAGGAGAATATCGATTACCTATTTTTCAATTTGATGGTAATCGATTAGTGGATGGATTAGATGAGATCTTAATTTTATTGGATGGTTTAAGCTCAACAACAAAAGTATCATTTTTAACGAGTATGTATTTTTTTGAGGATGAACAAGATATTAATGTTATTGATGCGCTTAAAAAATATGGACGCATGAGTGAACAAATGCAAGAAATTATTCATCAAGCTAAACTTTTTGGAAAACATATTTCAAACTAATAAAAATCTACTCATTATCGTTGATCTTAAAATGTAATGTTTCAGTAATG