Orthogroup:group_377


Homologs in group_377

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14290 FBDBKF_14290 Morganella morganii S1 - Colicin pore forming domain-containing protein
EHELCC_07990 EHELCC_07990 Morganella morganii S2 - Colicin pore forming domain-containing protein
NLDBIP_08315 NLDBIP_08315 Morganella morganii S4 - Colicin pore forming domain-containing protein
LHKJJB_05950 LHKJJB_05950 Morganella morganii S3 - Colicin pore forming domain-containing protein
HKOGLL_04965 HKOGLL_04965 Morganella morganii S5 - Colicin pore forming domain-containing protein
F4V73_RS02615 F4V73_RS02615 Morganella psychrotolerans - colicin-like pore-forming protein
PMI_RS18765 PMI_RS18765 Proteus mirabilis HI4320 - colicin-like pore-forming protein
PMI_RS18775 PMI_RS18775 Proteus mirabilis HI4320 - colicin-like pore-forming protein

Distribution of group_377 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_377 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_377

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_377.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 8

Product

# Product Occurence
1 Colicin pore forming domain-containing protein 5
2 colicin-like pore-forming protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1579 1 R General function prediction only (R) Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01024 8 Colicin pore forming domain
PF06958 1 S-type Pyocin

Annotations of the 11 SwissProt hits

Annotation Number of occurrences
Colicin-10 1
Colicin-5 1
Colicin-A 1
Colicin-A (Fragment) 1
Colicin-B 1
Colicin-E1 1
Colicin-E1* 1
Colicin-Ia 1
Colicin-Ib 1
Colicin-K 1
Colicin-N 1

Protein length

Min length 411
Max length 564
Mean length (sd) 439.8 (57.0)
Median length 411.0

Protein length distribution