Orthogroup:group_3474



Homologs in group_3474

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16670 FBDBKF_16670 Morganella morganii S1 - Tyrosine-type recombinase/integrase
EHELCC_10790 EHELCC_10790 Morganella morganii S2 - Tyrosine-type recombinase/integrase
NLDBIP_11135 NLDBIP_11135 Morganella morganii S4 - Tyrosine-type recombinase/integrase
LHKJJB_10220 LHKJJB_10220 Morganella morganii S3 - Tyrosine-type recombinase/integrase
HKOGLL_16385 HKOGLL_16385 Morganella morganii S5 - Tyrosine-type recombinase/integrase

Distribution of group_3474 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3474 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3474

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3474.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 5

Product

# Product Occurence
1 Tyrosine-type recombinase/integrase 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4974 5 L Replication, recombination and repair (L) Site-specific recombinase XerD

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00589 5 Phage integrase family
PF13102 5 Phage integrase SAM-like domain

Annotations of the 72 SwissProt hits

Annotation Number of occurrences
Putative tyrosine recombinase XerC 2
Tyrosine recombinase THA_404 1
Tyrosine recombinase XerA 5
Tyrosine recombinase XerC 46
Tyrosine recombinase XerD 11
Tyrosine recombinase XerS 7

Protein length

Unique protein length 320

Protein length distribution