Orthogroup:group_3462



Homologs in group_3462

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15695 FBDBKF_15695 Morganella morganii S1 spoIVCA Site-specific DNA recombinase SpoIVCA/DNA invertase PinE
EHELCC_16050 EHELCC_16050 Morganella morganii S2 spoIVCA Site-specific DNA recombinase SpoIVCA/DNA invertase PinE
NLDBIP_16315 NLDBIP_16315 Morganella morganii S4 spoIVCA Site-specific DNA recombinase SpoIVCA/DNA invertase PinE
LHKJJB_16485 LHKJJB_16485 Morganella morganii S3 spoIVCA Site-specific DNA recombinase SpoIVCA/DNA invertase PinE
HKOGLL_16255 HKOGLL_16255 Morganella morganii S5 spoIVCA Site-specific DNA recombinase SpoIVCA/DNA invertase PinE

Distribution of group_3462 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3462 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3462

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3462.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 spoIVCA 5

Product

# Product Occurence
1 Site-specific DNA recombinase SpoIVCA/DNA invertase PinE 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1961 5 L Replication, recombination and repair (L) Site-specific DNA recombinase SpoIVCA/DNA invertase PinE

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K14060 5 putative DNA-invertase from lambdoid prophage Rac - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00239 5 Resolvase, N terminal domain

Annotations of the 34 SwissProt hits

Annotation Number of occurrences
DNA-invertase 3
DNA-invertase hin 1
Integrase-like protein y4lS 1
Probable DNA-invertase y4cG 1
Protein uvp1 1
Putative DNA recombinase 1
Putative DNA-invertase from lambdoid prophage Rac 1
Putative transposon Tn552 DNA-invertase bin3 1
R46 site-specific recombinase 1
Resolvase 3
Resolvase homolog YefC 1
Resolvase/recombinase 1
Serine recombinase PinE 1
Serine recombinase PinQ 1
Serine recombinase PinR 1
Serine recombinase gin 2
Transposon Tn1331 resolvase 1
Transposon Tn1546 resolvase 1
Transposon Tn21 resolvase 1
Transposon Tn2501 resolvase 1
Transposon Tn3 resolvase 2
Transposon Tn501 resolvase 1
Transposon Tn552 DNA-invertase BinR 1
Transposon Tn552 resolvase 1
Transposon Tn917 resolvase 1
Transposon gamma-delta resolvase 1
Transposons Tn1721 resolvase 1
Transposons Tn4653 resolvase 1

Protein length

Unique protein length 204

Protein length distribution