Orthogroup:group_3458


Homologs in group_3458

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15665 FBDBKF_15665 Morganella morganii S1 - DEAD/DEAH box helicase
EHELCC_16020 EHELCC_16020 Morganella morganii S2 - DEAD/DEAH box helicase
NLDBIP_16345 NLDBIP_16345 Morganella morganii S4 - DEAD/DEAH box helicase
LHKJJB_16455 LHKJJB_16455 Morganella morganii S3 - DEAD/DEAH box helicase
HKOGLL_16225 HKOGLL_16225 Morganella morganii S5 - DEAD/DEAH box helicase

Distribution of group_3458 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3458 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3458

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3458.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 5

Product

# Product Occurence
1 DEAD/DEAH box helicase 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4096 5 V Defense mechanisms (V) Type I site-specific restriction endonuclease, part of a restriction-modification system

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01153 5 type I restriction enzyme, R subunit [EC:3.1.21.3] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00271 5 Helicase conserved C-terminal domain
PF04851 5 Type III restriction enzyme, res subunit
PF08463 5 EcoEI R protein C-terminal

Annotations of the 21 SwissProt hits

Annotation Number of occurrences
ATP-dependent DNA helicase MPH1 3
ATP-dependent DNA helicase uvsW 1
DEAD-box ATP-dependent DNA helicase Fancm 1
Probable helicase A859L 1
Putative ATP-dependent helicase IRC3 1
Putative DNA repair helicase RadD 1
Putative mitochondrial ATP-dependent helicase irc3 1
Type I restriction enzyme EcoAI endonuclease subunit 1
Type I restriction enzyme EcoEI endonuclease subunit 1
Type I restriction enzyme EcoKI endonuclease subunit 1
Type I restriction enzyme HindI endonuclease subunit 1
Type I restriction enzyme SauCOLORF180P endonuclease subunit 1
Type I restriction enzyme SauMRSORF196P endonuclease subunit 1
Type I restriction enzyme SauMSSORF170P endonuclease subunit 1
Type I restriction enzyme SauMW2ORF169P endonuclease subunit 1
Type I restriction enzyme SauMu50ORF195P endonuclease subunit 1
Type I restriction enzyme SauN315I endonuclease subunit 1
Type I restriction enzyme SepRPIP endonuclease subunit 1
Type I restriction enzyme SsaAORF53P endonuclease subunit 1

Protein length

Unique protein length 776

Protein length distribution