Orthogroup:group_3447


Homologs in group_3447

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14965 FBDBKF_14965 Morganella morganii S1 kdgM Oligogalacturonate-specific porin kdgM
EHELCC_11280 EHELCC_11280 Morganella morganii S2 kdgM Oligogalacturonate-specific porin kdgM
NLDBIP_11625 NLDBIP_11625 Morganella morganii S4 kdgM Oligogalacturonate-specific porin kdgM
LHKJJB_11485 LHKJJB_11485 Morganella morganii S3 kdgM Oligogalacturonate-specific porin kdgM
HKOGLL_10095 HKOGLL_10095 Morganella morganii S5 kdgM Oligogalacturonate-specific porin kdgM

Distribution of group_3447 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3447 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3447

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3447.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 kdgM 5

Product

# Product Occurence
1 Oligogalacturonate-specific porin kdgM 5

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K22110 5 oligogalacturonate-specific porin family protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06178 5 Oligogalacturonate-specific porin protein (KdgM)

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
N-acetylneuraminic acid outer membrane channel protein NanC 4
Oligogalacturonate-specific porin KdgM 1
Uncharacterized protein YiiY 2

Protein length

Unique protein length 229

Protein length distribution