Orthogroup:group_3446


Homologs in group_3446

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14595 FBDBKF_14595 Morganella morganii S1 fimD Outer membrane usher protein FimD/PapC
EHELCC_15400 EHELCC_15400 Morganella morganii S2 fimD Outer membrane usher protein FimD/PapC
NLDBIP_15930 NLDBIP_15930 Morganella morganii S4 fimD Outer membrane usher protein FimD/PapC
LHKJJB_15910 LHKJJB_15910 Morganella morganii S3 fimD Outer membrane usher protein FimD/PapC
HKOGLL_15030 HKOGLL_15030 Morganella morganii S5 fimD Outer membrane usher protein FimD/PapC

Distribution of group_3446 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3446 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3446

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3446.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimD 5

Product

# Product Occurence
1 Outer membrane usher protein FimD/PapC 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3188 5 NW Cell motility (N)
Extracellular structures (W)		 Outer membrane usher protein FimD/PapC

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00577 5 Outer membrane usher protein
PF13953 5 PapC C-terminal domain
PF13954 5 PapC N-terminal domain

Annotations of the 39 SwissProt hits

Annotation Number of occurrences
F1 capsule-anchoring protein 1
Fimbrial usher domain-containing protein YdeT 2
Outer membrane usher protein AfaC 1
Outer membrane usher protein AggC 1
Outer membrane usher protein CS3-2 1
Outer membrane usher protein CssD 2
Outer membrane usher protein FaeD 1
Outer membrane usher protein FanD 1
Outer membrane usher protein FasD 1
Outer membrane usher protein FimC 1
Outer membrane usher protein FimD 2
Outer membrane usher protein FocD 1
Outer membrane usher protein HifC 3
Outer membrane usher protein HtrE 1
Outer membrane usher protein LpfC 1
Outer membrane usher protein MrkC 1
Outer membrane usher protein MyfC 1
Outer membrane usher protein PapC 1
Outer membrane usher protein PefC 1
Outer membrane usher protein PmfC 1
Outer membrane usher protein PsaC 2
Outer membrane usher protein SefC 1
Outer membrane usher protein SfmD 1
Outer membrane usher protein YehB 1
Outer membrane usher protein YraJ 1
Probable outer membrane usher protein ElfC 2
Probable outer membrane usher protein LpfC 1
Probable outer membrane usher protein LpfC' 1
Putative outer membrane usher protein YfcU 1
Putative outer membrane usher protein YqiG 1
Uncharacterized outer membrane usher protein YbgQ 1
Uncharacterized outer membrane usher protein YhcD 1

Protein length

Unique protein length 800

Protein length distribution