Homologs in group_3387

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_08895 EHELCC_08895 100.0 Morganella morganii S2 - Helix-turn-helix domain-containing protein
NLDBIP_09220 NLDBIP_09220 100.0 Morganella morganii S4 - Helix-turn-helix domain-containing protein
LHKJJB_05045 LHKJJB_05045 100.0 Morganella morganii S3 - Helix-turn-helix domain-containing protein
HKOGLL_05870 HKOGLL_05870 100.0 Morganella morganii S5 - Helix-turn-helix domain-containing protein

Distribution of the homologs in the orthogroup group_3387

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3387

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_13200
Feature type CDS
Gene -
Product Helix-turn-helix domain-containing protein
Location 29299 - 29520 (strand: -1)
Length 222 (nucleotides) / 73 (amino acids)
In genomic island -

Contig

Accession contig_16
Length 109220 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3387
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MSLYETLKGIYKTNAAIGMAYPLKGKPRSSQGVGKWKWRGVPEDVAILCHYDPEIPYTHESLNHASEPKHTDA

Flanking regions ( +/- flanking 50bp)

TTCTATCTGATAAATTTAAATGATACTATAGTTACATTGAGATTATCAGAATGAGCTTATACGAAACCCTGAAGGGTATTTACAAAACGAACGCCGCGATCGGGATGGCATATCCACTCAAAGGTAAACCACGCAGCAGTCAAGGTGTGGGTAAGTGGAAATGGCGTGGTGTACCTGAAGATGTGGCGATTCTGTGTCATTACGATCCTGAAATTCCCTACACACACGAGTCACTGAACCATGCATCCGAACCAAAACACACTGATGCCTGACAACTATTTTCCTGATGACGGCAAATGGATTCAGGAAATGCTGTTGCAGT