Homologs in group_3389

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13200 FBDBKF_13200 100.0 Morganella morganii S1 - Helix-turn-helix domain-containing protein
EHELCC_08895 EHELCC_08895 100.0 Morganella morganii S2 - Helix-turn-helix domain-containing protein
NLDBIP_09220 NLDBIP_09220 100.0 Morganella morganii S4 - Helix-turn-helix domain-containing protein
HKOGLL_05870 HKOGLL_05870 100.0 Morganella morganii S5 - Helix-turn-helix domain-containing protein

Distribution of the homologs in the orthogroup group_3389

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3389

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_05045
Feature type CDS
Gene -
Product Helix-turn-helix domain-containing protein
Location 11267 - 11488 (strand: -1)
Length 222 (nucleotides) / 73 (amino acids)

Contig

Accession ZDB_362
Length 257361 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3389
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MSLYETLKGIYKTNAAIGMAYPLKGKPRSSQGVGKWKWRGVPEDVAILCHYDPEIPYTHESLNHASEPKHTDA

Flanking regions ( +/- flanking 50bp)

TTCTATCTGATAAATTTAAATGATACTATAGTTACATTGAGATTATCAGAATGAGCTTATACGAAACCCTGAAGGGTATTTACAAAACGAACGCCGCGATCGGGATGGCATATCCACTCAAAGGTAAACCACGCAGCAGTCAAGGTGTGGGTAAGTGGAAATGGCGTGGTGTACCTGAAGATGTGGCGATTCTGTGTCATTACGATCCTGAAATTCCCTACACACACGAGTCACTGAACCATGCATCCGAACCAAAACACACTGATGCCTGACAACTATTTTCCTGATGACGGCAAATGGATTCAGGAAATGCTGTTGCAGT