Orthogroup:group_3215


Homologs in group_3215

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02800 FBDBKF_02800 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_03270 EHELCC_03270 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_00190 NLDBIP_00190 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_01845 LHKJJB_01845 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_01885 HKOGLL_01885 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Distribution of group_3215 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3215 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3215

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3215.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acrR 5

Product

# Product Occurence
1 DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1309 5 K Transcription (K) DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00440 5 Bacterial regulatory proteins, tetR family

Annotations of the 4 SwissProt hits

Annotation Number of occurrences
Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR 1
HTH-type transcriptional repressor BdcR 1
HTH-type transcriptional repressor ComR 1
Uncharacterized HTH-type transcriptional regulator YezE 1

Protein length

Unique protein length 204

Protein length distribution