Orthogroup:group_3164


Homologs in group_3164

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00450 FBDBKF_00450 Morganella morganii S1 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
EHELCC_01095 EHELCC_01095 Morganella morganii S2 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
NLDBIP_02365 NLDBIP_02365 Morganella morganii S4 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
LHKJJB_03880 LHKJJB_03880 Morganella morganii S3 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
HKOGLL_03165 HKOGLL_03165 Morganella morganii S5 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain

Distribution of group_3164 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3164 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3164

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3164.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hisJ 5

Product

# Product Occurence
1 ABC-type amino acid transport/signal transduction system, periplasmic component/domain 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0834 5 ET Amino acid transport and metabolism (E)
Signal transduction mechanisms (T)		 ABC-type amino acid transport/signal transduction system, periplasmic component/domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02030 5 polar amino acid transport system substrate-binding protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00497 5 Bacterial extracellular solute-binding proteins, family 3

Annotations of the 57 SwissProt hits

Annotation Number of occurrences
ABC transporter D-alanine-binding periplasmic protein 1
ABC transporter arginine-binding protein 1
ABC transporter arginine-binding protein 1 1
ABC transporter glutamine-binding protein GlnH 1
Amino-acid-binding protein AabA 1
Arginine-binding extracellular protein ArtP 1
Arginine-binding periplasmic protein 1
Arginine-binding protein ArgT 1
Cyclohexadienyl dehydratase 1
Glutamate receptor 1
Glutamate receptor ionotropic, NMDA 3B 1
Glutamate receptor ionotropic, delta-1 3
Glutamate receptor ionotropic, kainate 4 4
Glutamate-binding protein GluB 2
Glutamine-binding periplasmic protein 3
Glutamine-binding protein 1
Histidine-binding periplasmic protein 4
L-arginine-binding protein 1
L-cystine-binding protein TcyA 1
L-cystine-binding protein TcyJ 3
Lysine/arginine/ornithine-binding periplasmic protein 2
Major cell-binding factor 2
Membrane-bound lytic murein transglycosylase F 4
Membrane-bound lytic murein transglycosylase F 1 1
Nopaline-binding periplasmic protein 1
Octopine-binding periplasmic protein 3
Probable ABC transporter arginine-binding protein ArtJ 2
Probable ABC transporter extracellular-binding protein YckB 1
Probable amino-acid ABC transporter-binding protein HI_1080 1
Probable amino-acid-binding protein YxeM 1
Probable glutamate receptor 1
Probable histidine-binding protein 2
Putative ABC transporter arginine-binding protein 2 1
Putative amino-acid ABC transporter-binding protein PatH 1
Putative sensor protein Sfri_3689 1

Protein length

Unique protein length 255

Protein length distribution