Orthogroup:group_3045



Homologs in group_3045

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18185 FBDBKF_18185 Morganella morganii S1 soxR DNA-binding transcriptional regulator, MerR family
EHELCC_18220 EHELCC_18220 Morganella morganii S2 soxR DNA-binding transcriptional regulator, MerR family
NLDBIP_18145 NLDBIP_18145 Morganella morganii S4 soxR DNA-binding transcriptional regulator, MerR family
LHKJJB_18340 LHKJJB_18340 Morganella morganii S3 soxR DNA-binding transcriptional regulator, MerR family
HKOGLL_18075 HKOGLL_18075 Morganella morganii S5 soxR DNA-binding transcriptional regulator, MerR family
F4V73_RS01730 F4V73_RS01730 Morganella psychrotolerans - MerR family transcriptional regulator

Distribution of group_3045 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3045 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3045

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3045.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 soxR 5
2 - 1

Product

# Product Occurence
1 DNA-binding transcriptional regulator, MerR family 5
2 MerR family transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0789 6 K Transcription (K) DNA-binding transcriptional regulator, MerR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K21745 6 MerR family transcriptional regulator, aldehyde-responsive regulator - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13411 6 MerR HTH family regulatory protein

Annotations of the 36 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional activator TipA 2
HTH-type transcriptional regulator AdhR 1
HTH-type transcriptional regulator CueR 10
HTH-type transcriptional regulator GlnR 1
HTH-type transcriptional regulator HmrR 2
HTH-type transcriptional regulator TnrA 1
HTH-type transcriptional regulator YfmP 1
HTH-type transcriptional regulator ZntR homolog 1
HTH-type transcriptional repressor BluR 1
HTH-type transcriptional repressor CarH 1
Heavy metal-dependent transcription regulator 2 1
Mercuric resistance operon regulatory protein 2
Mercuric resistance operon regulatory protein (Fragment) 1
Nodulation protein NolA 1
Nodulation protein NolA (Fragment) 1
Probable heavy metal-dependent transcriptional regulator HI_0293 1
Putative heat shock protein HspR 1
Redox-sensitive transcriptional activator SoxR 1
Uncharacterized HTH-type transcriptional regulator HI_0186 1
Uncharacterized HTH-type transcriptional regulator MT1876 1
Uncharacterized HTH-type transcriptional regulator Mb1859 1
Uncharacterized HTH-type transcriptional regulator Rv1828 1
Uncharacterized HTH-type transcriptional regulator YyaN 1
Uncharacterized HTH-type transcriptional regulator slr0701 1

Protein length

Unique protein length 122

Protein length distribution