Homologs in group_3041

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18145 FBDBKF_18145 68.1 Morganella morganii S1 mrfF MrfF
EHELCC_16845 EHELCC_16845 68.1 Morganella morganii S2 mrfF MrfF
NLDBIP_17605 NLDBIP_17605 68.1 Morganella morganii S4 mrfF MrfF
LHKJJB_17525 LHKJJB_17525 68.1 Morganella morganii S3 mrfF MrfF
HKOGLL_17340 HKOGLL_17340 68.1 Morganella morganii S5 mrfF MrfF

Distribution of the homologs in the orthogroup group_3041

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3041

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76501 4.82e-12 63 26 4 128 2 yfcR Uncharacterized fimbrial-like protein YfcR Escherichia coli (strain K12)
P76500 4.48e-09 55 24 6 171 2 yfcQ Uncharacterized fimbrial-like protein YfcQ Escherichia coli (strain K12)
P42187 0.00029 42 27 2 86 1 prsF Minor fimbrial protein PrsF Escherichia coli
P08408 0.000713 41 32 1 64 1 papF Fimbrial adapter PapF Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10350
Feature type CDS
Gene -
Product fimbrial protein
Location 180381 - 180872 (strand: -1)
Length 492 (nucleotides) / 163 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3041
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MIHSFLTRTGCAAFLCLPLTVSGASYTYLDVYVRGEIYSAPCKVNQGKNILVDFKDVITTRIDHDNYSEKLDYRIECQDSRARGIKIYISGKPSAVDKRYLSTSADDLAVKFQSNNTLLSLDEKIAVQYPSQPEIRVVLAKKPGAKLPSGNFSATATIHIEYE

Flanking regions ( +/- flanking 50bp)

GTACAGGCAGACAATAAATAATCTGCTGAGCAATAAAAGGAGAAACGCCGGTGATCCACTCATTTTTAACCCGAACAGGATGTGCAGCATTTTTGTGCCTGCCGCTGACGGTATCCGGCGCGTCCTATACCTATCTTGATGTTTATGTCAGGGGTGAAATTTATTCCGCACCCTGCAAAGTTAATCAGGGTAAAAATATTTTGGTCGATTTTAAAGACGTTATTACCACGCGCATTGATCATGATAATTACAGTGAAAAGCTGGATTACCGGATAGAGTGCCAGGATAGCCGGGCGCGCGGTATCAAGATATATATCAGCGGCAAACCGTCCGCTGTTGATAAGCGTTATCTCTCCACCAGCGCAGATGACCTGGCGGTAAAATTTCAGTCAAATAACACGCTGCTTTCGCTGGATGAAAAAATAGCCGTTCAATATCCGTCTCAACCGGAAATAAGAGTAGTGCTGGCCAAAAAACCCGGTGCCAAATTACCGTCCGGAAACTTCAGTGCAACTGCAACTATCCATATTGAATACGAATAAGGCGCTGTGATGAAACTATTTTCCGCTGCTCTGCTTCTGGCATGTATAAC