COG3208


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3208, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Surfactin synthase thioesterase subunit
Function(s) descr. Secondary metabolites biosynthesis, transport and catabolism (Q)

Occurence in the database

COG3208 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3018 FBDBKF_17895 17716 18489 1 grsT Surfactin synthase thioesterase subunit Morganella morganii S1
1 group_3018 EHELCC_06440 17887 18660 -1 grsT Surfactin synthase thioesterase subunit Morganella morganii S2
2 group_3018 NLDBIP_06760 17760 18533 -1 grsT Surfactin synthase thioesterase subunit Morganella morganii S4
3 group_3018 LHKJJB_18900 17724 18497 1 grsT Surfactin synthase thioesterase subunit Morganella morganii S3
4 group_3018 HKOGLL_04630 251108 251881 1 grsT Surfactin synthase thioesterase subunit Morganella morganii S5
5 group_3018 PMI_RS12850 2851367 2852140 1 thioesterase domain-containing protein Proteus mirabilis HI4320