Orthogroup:group_3003


Homologs in group_3003

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17600 FBDBKF_17600 Morganella morganii S1 metC Cystathionine beta-lyase/cystathionine gamma-synthase
EHELCC_18085 EHELCC_18085 Morganella morganii S2 metC Cystathionine beta-lyase/cystathionine gamma-synthase
NLDBIP_18065 NLDBIP_18065 Morganella morganii S4 metC Cystathionine beta-lyase/cystathionine gamma-synthase
LHKJJB_18260 LHKJJB_18260 Morganella morganii S3 metC Cystathionine beta-lyase/cystathionine gamma-synthase
HKOGLL_17940 HKOGLL_17940 Morganella morganii S5 metC Cystathionine beta-lyase/cystathionine gamma-synthase
F4V73_RS14980 F4V73_RS14980 Morganella psychrotolerans - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme

Distribution of group_3003 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3003 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3003

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3003.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 metC 5
2 - 1

Product

# Product Occurence
1 Cystathionine beta-lyase/cystathionine gamma-synthase 5
2 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0626 6 E Amino acid transport and metabolism (E) Cystathionine beta-lyase/cystathionine gamma-synthase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01053 6 Cys/Met metabolism PLP-dependent enzyme

Annotations of the 85 SwissProt hits

Annotation Number of occurrences
Alanine racemase ungC 1
Alanine racemase ungC' 1
Canavanine gamma-lyase 2
Cystathionine beta-lyase 10
Cystathionine beta-lyase MetC 3
Cystathionine beta-lyase, chloroplastic 2
Cystathionine gamma-lyase 9
Cystathionine gamma-synthase 11
Cystathionine gamma-synthase 1, chloroplastic 1
Cystathionine gamma-synthase-like enzyme iboG1 1
Cystathionine gamma-synthase-like enzyme iboG2 1
Cystathionine gamma-synthase-like protein ankD 1
Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase 1
Homocysteine synthase 2
Homocysteine/cysteine synthase 3
L-2-amino-4-chloropent-4-enoate dechlorinase/desaturase 1
L-alanine/L-glutamate racemase 2
L-methionine gamma-lyase 7
Methionine gamma-lyase 1
Mimosinase, chloroplastic 2
O-acetyl-L-homoserine sulfhydrylase 3
O-acetyl-L-homoserine sulfhydrylase 1 1
O-acetyl-L-homoserine sulfhydrylase 2 1
O-succinylhomoserine sulfhydrylase 3
Probable cystathionine gamma-synthase 1
Probable cystathionine gamma-synthase (Fragment) 1
Probable cystathionine gamma-synthase 2 1
Putative cystathionine beta-lyase 2
Putative cystathionine gamma-lyase 1
Putative cystathionine gamma-lyase 2 1
Putative cystathionine gamma-synthase YML082W 1
Sulfhydrylase FUB7 3
Sulfhydrylase-like protein lolC1 1
Sulfhydrylase-like protein lolC2 1
Uncharacterized trans-sulfuration enzyme C23A1.14c 1
Uncharacterized trans-sulfuration enzyme YHR112C 1

Protein length

Unique protein length 390

Protein length distribution