Orthogroup:group_290


Homologs in group_290

Help

8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09410 FBDBKF_09410 Morganella morganii S1 potB spermidine/putrescine ABC transporter permease PotB
EHELCC_10000 EHELCC_10000 Morganella morganii S2 potB spermidine/putrescine ABC transporter permease PotB
NLDBIP_10345 NLDBIP_10345 Morganella morganii S4 potB spermidine/putrescine ABC transporter permease PotB
LHKJJB_11010 LHKJJB_11010 Morganella morganii S3 potB spermidine/putrescine ABC transporter permease PotB
HKOGLL_14070 HKOGLL_14070 Morganella morganii S5 potB spermidine/putrescine ABC transporter permease PotB
HKOGLL_19760 HKOGLL_19760 Morganella morganii S5 - hypothetical protein
F4V73_RS10555 F4V73_RS10555 Morganella psychrotolerans potB spermidine/putrescine ABC transporter permease PotB
PMI_RS13485 PMI_RS13485 Proteus mirabilis HI4320 potB spermidine/putrescine ABC transporter permease PotB

Distribution of group_290 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_290 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_290

Orthogroup content: 8 members

Help

This page summarizes the annotation of all members of the orthologous group group_290.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 potB 7
2 - 1

Product

# Product Occurence
1 spermidine/putrescine ABC transporter permease PotB 7
2 hypothetical protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1176 8 E Amino acid transport and metabolism (E) ABC-type spermidine/putrescine transport system, permease component I

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11071 7 spermidine/putrescine transport system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 7 Binding-protein-dependent transport system inner membrane component

Annotations of the 72 SwissProt hits

Annotation Number of occurrences
Diacetylchitobiose uptake system permease protein NgcG 1
Ferric transport system permease protein FbpB 1
Glycine betaine/choline transport system permease protein OusW 1
Glycine betaine/proline betaine transport system permease protein ProW 2
Inner membrane ABC transporter permease protein YdcU 1
Methionine import system permease protein MetP 1
Molybdate/tungstate transport system permease protein WtpB 6
Molybdenum transport system permease protein ModB 8
Probable ABC transporter permease protein YurN 1
Probable ABC transporter permease protein y4fN 1
Probable ergothioneine transporter EgtUBC 2
Probable molybdenum ABC transporter permease protein HVO_B0370 1
Probable sulfate transport system permease protein cysT 8
Probable transport system permease protein NifC 1
Putative 2-aminoethylphosphonate transport system permease protein PhnU 4
Putative ABC transporter permease protein ORF1 (Fragment) 1
Putative ferric transport system permease protein FbpB 1 1
Putrescine transport system permease protein PotH 1
Putrescine transport system permease protein PotI 2
Spermidine/putrescine transport system permease protein PotB 6
Spermidine/putrescine transport system permease protein PotB homolog 2
Spermidine/putrescine transport system permease protein PotC 5
Spermidine/putrescine transport system permease protein PotC homolog 2
Sulfate permease 1, chloroplastic 1
Sulfate permease 2, chloroplastic 1
Sulfate transport system permease protein CysT 3
Sulfate transport system permease protein CysW 4
Trehalose transport system permease protein SugB 2
Trehalose/maltose transport system permease protein MalF 1
Trehalose/maltose transport system permease protein MalG 1

Protein length

Min length 49
Max length 286
Mean length (sd) 256.4 (83.8)
Median length 286.0

Protein length distribution