Orthogroup:group_288



Homologs in group_288

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06920 FBDBKF_06920 Morganella morganii S1 hisC histidinol-phosphate transaminase
EHELCC_04050 EHELCC_04050 Morganella morganii S2 hisC histidinol-phosphate transaminase
NLDBIP_04050 NLDBIP_04050 Morganella morganii S4 hisC histidinol-phosphate transaminase
LHKJJB_09880 LHKJJB_09880 Morganella morganii S3 hisC histidinol-phosphate transaminase
HKOGLL_09095 HKOGLL_09095 Morganella morganii S5 hisC histidinol-phosphate transaminase
F4V73_RS01105 F4V73_RS01105 Morganella psychrotolerans hisC histidinol-phosphate transaminase
PMI_RS03265 PMI_RS03265 Proteus mirabilis HI4320 hisC histidinol-phosphate transaminase
PMI_RS14095 PMI_RS14095 Proteus mirabilis HI4320 - valine--pyruvate transaminase

Distribution of group_288 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_288 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_288

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_288.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hisC 7
2 - 1

Product

# Product Occurence
1 histidinol-phosphate transaminase 7
2 valine--pyruvate transaminase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0079 7 E Amino acid transport and metabolism (E) Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase
COG3977 1 E Amino acid transport and metabolism (E) Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00155 8 Aminotransferase class I and II

Annotations of the 620 SwissProt hits

Annotation Number of occurrences
(5-formylfuran-3-yl)methyl phosphate transaminase 1
(S)-3,5-dihydroxyphenylglycine transaminase 1
1-aminocyclopropane-1-carboxylate synthase 2
1-aminocyclopropane-1-carboxylate synthase 1 1
1-aminocyclopropane-1-carboxylate synthase 2 2
1-aminocyclopropane-1-carboxylate synthase 4 2
2-aminoadipate transaminase 1
Aminotransferase ALD1, chloroplastic 1
Aminotransferase swnA 1
Aminotransferase tdiD 1
Aromatic amino acid aminotransferase C1773.13 1
Aromatic amino acid aminotransferase C569.07 1
Aromatic-amino-acid aminotransferase 1 1
Aromatic-amino-acid aminotransferase 2 1
Aromatic/aminoadipate aminotransferase 1 1
Asparagine--oxo-acid transaminase 1
Aspartate aminotransferase 13
Aspartate/prephenate aminotransferase 1
Capreomycidine synthase 1
Cystathionine beta-lyase 1
Cystathionine beta-lyase PatB 1
Cystine lyase CORI3 1
Dihydroxyacetone phosphate transaminase Cj1437c 1
Glutamate-pyruvate aminotransferase AlaC 1
HTH-type transcriptional regulator NorG 6
Histidinol-phosphate aminotransferase 402
Histidinol-phosphate aminotransferase 1 42
Histidinol-phosphate aminotransferase 1, chloroplastic 1
Histidinol-phosphate aminotransferase 2 43
Histidinol-phosphate aminotransferase 2, chloroplastic 1
Histidinol-phosphate aminotransferase 3 2
Histidinol-phosphate aminotransferase, chloroplastic 2
Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial 3
LL-diaminopimelate aminotransferase 21
LL-diaminopimelate aminotransferase 2 1
Nicotianamine aminotransferase 1 1
Nicotianamine aminotransferase A 1
Nicotianamine aminotransferase B 1
Probable N-acetyl-LL-diaminopimelate aminotransferase 1
Probable alanine aminotransferase, mitochondrial 1
Probable aminotransferase TAT2 1
Probable aminotransferase TAT3 1
Probable aspartate aminotransferase 1
Probable aspartate/prephenate aminotransferase 4
Probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 1
Probable kynurenine--oxoglutarate transaminase BNA3 1
Probable phenylalanine aminotransferase 1
Putative aminotransferase AatC 1
Putative aminotransferase YugH 1
Putative aspartate aminotransferase YhdR 1
Putative histidine biosynthesis bifunctional protein HisCD 1
Putative phenylalanine aminotransferase 22
Transaminase BacF 1
Tyrosine aminotransferase 6
Uncharacterized HTH-type transcriptional regulator YdcR 1
Uncharacterized HTH-type transcriptional regulator YdfD 1
Uncharacterized HTH-type transcriptional regulator YisV 1
Uncharacterized HTH-type transcriptional regulator YjiR 1
Uncharacterized aminotransferase C6B12.04c 1
Uncharacterized aminotransferase SSO0104 1
Uncharacterized protein YER152C 1
Valine--pyruvate aminotransferase 2

Protein length

Min length 358
Max length 427
Mean length (sd) 366.9 (24.3)
Median length 358.0

Protein length distribution