Orthogroup:group_2754


Homologs in group_2754

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07680 FBDBKF_07680 Morganella morganii S1 ygfM Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit
EHELCC_13510 EHELCC_13510 Morganella morganii S2 ygfM Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit
NLDBIP_13955 NLDBIP_13955 Morganella morganii S4 ygfM Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit
LHKJJB_08895 LHKJJB_08895 Morganella morganii S3 ygfM Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit
HKOGLL_08445 HKOGLL_08445 Morganella morganii S5 ygfM Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit
F4V73_RS13420 F4V73_RS13420 Morganella psychrotolerans ygfM molybdopterin-dependent oxidoreductase FAD-binding subunit

Distribution of group_2754 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2754 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2754

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2754.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ygfM 6

Product

# Product Occurence
1 Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit 5
2 molybdopterin-dependent oxidoreductase FAD-binding subunit 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1319 6 C Energy production and conversion (C) Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K12529 6 putative selenate reductase FAD-binding subunit Selenocompound metabolism -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00941 6 FAD binding domain in molybdopterin dehydrogenase

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Indole-3-acetaldehyde oxidase 1
Nicotinate dehydrogenase FAD-subunit 1
Nicotine 6-hydroxylase medium subunit 1
Probable xanthine dehydrogenase subunit C 1
Uncharacterized protein YgfM 2
Xanthine dehydrogenase 1

Protein length

Min length 257
Max length 258
Mean length (sd) 257.2 (0.4)
Median length 257.0

Protein length distribution