COG3799


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3799, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Methylaspartate ammonia-lyase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG3799 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2730 FBDBKF_07480 8652 9893 1 mal methylaspartate ammonia-lyase Morganella morganii S1
1 group_2730 EHELCC_17150 36302 37543 1 mal methylaspartate ammonia-lyase Morganella morganii S2
2 group_2730 NLDBIP_13755 3721 4962 1 mal methylaspartate ammonia-lyase Morganella morganii S4
3 group_2730 LHKJJB_09095 154787 156028 -1 mal methylaspartate ammonia-lyase Morganella morganii S3
4 group_2730 HKOGLL_08645 154787 156028 -1 mal methylaspartate ammonia-lyase Morganella morganii S5
5 group_2730 F4V73_RS13635 361962 363203 -1 methylaspartate ammonia-lyase Morganella psychrotolerans