Orthogroup:group_2666


Homologs in group_2666

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04710 FBDBKF_04710 Morganella morganii S1 rbsB ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain
EHELCC_06000 EHELCC_06000 Morganella morganii S2 rbsB ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain
NLDBIP_06320 NLDBIP_06320 Morganella morganii S4 rbsB ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain
LHKJJB_03200 LHKJJB_03200 Morganella morganii S3 rbsB ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain
HKOGLL_06675 HKOGLL_06675 Morganella morganii S5 rbsB ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain
F4V73_RS09185 F4V73_RS09185 Morganella psychrotolerans - substrate-binding domain-containing protein

Distribution of group_2666 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2666 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2666

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2666.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rbsB 5
2 - 1

Product

# Product Occurence
1 ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain 5
2 substrate-binding domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1879 6 G Carbohydrate transport and metabolism (G) ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K17205 6 putative xylitol transport system substrate-binding protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13407 6 Periplasmic binding protein domain

Annotations of the 29 SwissProt hits

Annotation Number of occurrences
D-allose-binding periplasmic protein 1
D-apiose import binding protein 4
D-galactose/methyl-galactoside binding periplasmic protein MglB 6
D-ribose/D-allose-binding protein 1
D-threitol-binding protein 1
D-xylose-binding periplasmic protein 2
Fructose import binding protein FruE 1
Galactofuranose-binding protein YtfQ 1
HTH-type transcriptional regulator AscG 1
HTH-type transcriptional repressor PurR 4
Putative rhizopine-binding protein 1
Ribose import binding protein RbsB 5
Xylitol-binding protein 1

Protein length

Min length 319
Max length 333
Mean length (sd) 330.7 (5.7)
Median length 333.0

Protein length distribution